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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100282247   cofactor required for Sp1 transcriptional activation subunit 9 
 zma-r.6   100282247   cofactor required for Sp1 transcriptional activation subunit 9 
 zma-u.5   100274258   uncharacterized LOC100274258 
 osa-u.5   4337290   mediator of RNA polymerase II transcription subunit 7a 
 ath-u.5   AT5G03500   Mediator complex, subunit Med7 
 ath-u.5   AT5G03220   Mediator complex, subunit Med7 
 gma-u.5   100812231   mediator of RNA polymerase II transcription subunit 7-like 
 gma-u.5   100792250   mediator of RNA polymerase II transcription subunit 7-like 
 sly-u.5   101262307   mediator of RNA polymerase II transcription subunit 7a 
 vvi-u.5   100257245   mediator of RNA polymerase II transcription subunit 7a 
 ppo-u.5   7469914   mediator of RNA polymerase II transcription subunit 7a 
 mtr-u.5   25497291   mediator of RNA polymerase II transcription subunit 7a 
 mtr-u.5   25487810   mediator of RNA polymerase II transcription subunit 7a 

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Top 50 coexpressed genes to 100282247 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100282247 (zma-u.5 coexpression data)

CoexMap"100282247"


zmaLOC100282247 | Entrez gene ID : 100282247      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (427 genes)  IEA  
GO CC
GO:0070847 [list] [network] core mediator complex  (9 genes)  IEA  
GO:0016592 [list] [network] mediator complex  (45 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (148 genes)  IEA  
Protein NP_001148631.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  mito 1,  plas 1,  pero 1,  chlo_mito 1,  cyto_mito 1  (predict for NP_001148631.2)
Subcellular
localization
TargetP
other 4  (predict for NP_001148631.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100282247

.
zma-r.6
for
100282247

.
zma-u.5
for
100274258

.
osa-u.5
for
4337290

.
ath-u.5
for
AT5G03500

.
ath-u.5
for
AT5G03220

.
gma-u.5
for
100812231

.
gma-u.5
for
100792250

.
sly-u.5
for
101262307

.
vvi-u.5
for
100257245

.
ppo-u.5
for
7469914

.
mtr-u.5
for
25497291

.
mtr-u.5
for
25487810

.


Ortholog ID: 7726
Species ath ath gma gma sly osa zma zma bra bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G03500 AT5G03220 LOC100792250 LOC100812231 LOC101262307 LOC4337290 LOC100274258 LOC100282247 LOC103847399 LOC103850482 LOC100257245 LOC7469914 LOC25487810 LOC25497291 LOC123046981 LOC123190653 LOC123428035 LOC107934559 LOC107924169 LOC106372624 LOC106425283 CHLRE_01g062902v5 LOC8082541 LOC102597158 LOC102624512 LOC100825260 LOC107829808 LOC107770575
Function* Mediator complex, subunit Med7 Mediator complex, subunit Med7 mediator of RNA polymerase II transcription subunit 7-like mediator of RNA polymerase II transcription subunit 7-like mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a uncharacterized LOC100274258 cofactor required for Sp1 transcriptional activation subunit 9 mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a-like mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a uncharacterized protein mediator of RNA polymerase II transcription subunit 7b mediator of RNA polymerase II transcription subunit 7a-like mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a mediator of RNA polymerase II transcription subunit 7a-like mediator of RNA polymerase II transcription subunit 7a-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 4
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00510 N-Glycan biosynthesis 4
zma00513 Various types of N-glycan biosynthesis 4
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
bna04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03420 Nucleotide excision repair 3
sbi03010 Ribosome 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit04136 Autophagy - other 2
cit03040 Spliceosome 2
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03420 Nucleotide excision repair 3
bdi04120 Ubiquitin mediated proteolysis 3
bdi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831822 831902 100792250 100812231 101262307 4337290 100274258 100282247 103847399 103850482 100257245 7469914 25487810 25497291 123046981 123190653 123428035 107934559 107924169 106372624 106425283 5725791 8082541 102597158 102624512 100825260 107829808 107770575
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