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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100282973   uncharacterized LOC100282973 
 zma-r.6   100282973   uncharacterized LOC100282973 
 zma-m.5   100282973   uncharacterized LOC100282973 
 osa-u.5   4350689   protein MRG1 
 osa-u.5   4334885   protein MRG1 
 ath-u.5   AT4G37280   MRG family protein 
 ath-u.5   AT1G02740   MRG family protein 
 gma-u.5   100808266   protein MRG1 
 gma-u.5   100800645   protein MRG2 
 gma-u.5   100782900   protein MRG1 
 sly-u.5   101249778   nuA4 complex subunit EAF3 homolog 
 sly-u.5   101243988   MRG family protein 
 vvi-u.5   100242251   protein MRG1 
 vvi-u.5   100266105   protein MRG1 
 ppo-u.5   7483086   protein MRG1 
 ppo-u.5   7464894   protein MRG2 
 mtr-u.5   25493500   protein MRG1 
 mtr-u.5   25489912   protein MRG2 

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Top 50 coexpressed genes to 100282973 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100282973 (zma-u.5 coexpression data)

CoexMap"100282973"


zmaLOC100282973 | Entrez gene ID : 100282973      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 2 3 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03082 [list] [network] ATP-dependent chromatin remodeling (89 genes)
GO BP
GO:0006325 [list] [network] chromatin organization  (181 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1994 genes)  IEA  
GO CC
GO:0000123 [list] [network] histone acetyltransferase complex  (48 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
Protein NP_001149349.1 [sequence] [blastp]
XP_008643706.1 [sequence] [blastp]
XP_035823924.1 [sequence] [blastp]
XP_035823925.1 [sequence] [blastp]
XP_035823926.1 [sequence] [blastp]
XP_035823927.1 [sequence] [blastp]
XP_035823928.1 [sequence] [blastp]
XP_035823929.1 [sequence] [blastp]
XP_035823930.1 [sequence] [blastp]
XP_035823931.1 [sequence] [blastp]
XP_035823932.1 [sequence] [blastp]
XP_035823933.1 [sequence] [blastp]
XP_035823934.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  cyto 2  (predict for NP_001149349.1)
nucl 6,  cyto_nucl 4,  cyto 1  (predict for XP_008643706.1)
nucl 7,  cyto_nucl 5,  cyto 1  (predict for XP_035823924.1)
nucl 7,  cyto_nucl 5,  cyto 1  (predict for XP_035823925.1)
nucl 7,  cyto_nucl 5,  cyto 1  (predict for XP_035823926.1)
nucl 9  (predict for XP_035823927.1)
nucl 5,  cyto 2,  chlo 1,  cysk 1  (predict for XP_035823928.1)
nucl 6,  cyto 2,  cysk 1  (predict for XP_035823929.1)
nucl 9  (predict for XP_035823930.1)
nucl 9  (predict for XP_035823931.1)
nucl 4,  cyto 4,  cysk 1  (predict for XP_035823932.1)
nucl 4,  cyto 4,  cysk 1  (predict for XP_035823933.1)
nucl 9,  cyto_nucl 5  (predict for XP_035823934.1)
Subcellular
localization
TargetP
other 9,  chlo 3  (predict for NP_001149349.1)
other 9,  chlo 3  (predict for XP_008643706.1)
other 9,  chlo 3  (predict for XP_035823924.1)
other 9,  chlo 3  (predict for XP_035823925.1)
other 9,  chlo 3  (predict for XP_035823926.1)
other 9,  chlo 3  (predict for XP_035823927.1)
other 9,  chlo 3  (predict for XP_035823928.1)
other 9,  chlo 3  (predict for XP_035823929.1)
other 9,  chlo 3  (predict for XP_035823930.1)
other 9,  chlo 3  (predict for XP_035823931.1)
other 9,  chlo 3  (predict for XP_035823932.1)
other 9,  chlo 3  (predict for XP_035823933.1)
other 9,  chlo 3  (predict for XP_035823934.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100282973

.
zma-r.6
for
100282973

.
zma-m.5
for
100282973

.
osa-u.5
for
4350689

.
osa-u.5
for
4334885

.
ath-u.5
for
AT4G37280

.
ath-u.5
for
AT1G02740

.
gma-u.5
for
100808266

.
gma-u.5
for
100800645

.
gma-u.5
for
100782900

.
sly-u.5
for
101249778

.
sly-u.5
for
101243988

.
vvi-u.5
for
100242251

.
vvi-u.5
for
100266105

.
ppo-u.5
for
7483086

.
ppo-u.5
for
7464894

.
mtr-u.5
for
25493500

.
mtr-u.5
for
25489912

.


Ortholog ID: 4429
Species ath ath gma gma sly sly osa osa zma bra bra vvi vvi ppo ppo mtr mtr tae hvu ghi ghi bna bna cre sbi sot sot cit cit bdi nta nta
Symbol AT1G02740 AT4G37280 LOC100777259 LOC100782900 LOC101243988 LOC101249778 LOC4334885 LOC4350689 LOC100282973 LOC103861562 LOC103843740 LOC100242251 LOC100266105 LOC7464894 LOC7483086 LOC25489912 LOC25493500 LOC123051155 LOC123424445 LOC107941893 LOC107924149 LOC106369300 LOC106411824 CHLRE_16g692400v5 LOC110434696 LOC102602545 LOC102581078 LOC102625664 LOC102619381 LOC100841603 LOC107793186 LOC107767843
Function* MRG family protein MRG family protein protein MRG2 protein MRG1 MRG family protein nuA4 complex subunit EAF3 homolog protein MRG1 protein MRG1 uncharacterized LOC100282973 protein MRG1 protein MRG2 protein MRG1 protein MRG1 protein MRG2 protein MRG1 protein MRG2 protein MRG1 protein MRG1 protein MRG1 protein MRG1 protein MRG1 protein MRG2 protein MRG2 uncharacterized protein protein MRG1 protein MRG1 protein MRG1-like protein MRG1 protein MRG2-like protein MRG1 protein MRG2 protein MRG1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 3
ath04120 Ubiquitin mediated proteolysis 3
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 5
gma03030 DNA replication 4
gma03420 Nucleotide excision repair 3
gma03082 ATP-dependent chromatin remodeling 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 2
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra04712 Circadian rhythm - plant 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00240 Pyrimidine metabolism 2
ppo00410 beta-Alanine metabolism 2
ppo00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 5
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 5
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03082 ATP-dependent chromatin remodeling 2
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
bna04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 3
cre03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot03050 Proteasome 3
sot03010 Ribosome 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit03082 ATP-dependent chromatin remodeling 2
cit04144 Endocytosis 2
cit05100 Bacterial invasion of epithelial cells 2
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839455 829882 100777259 100782900 101243988 101249778 4334885 4350689 100282973 103861562 103843740 100242251 100266105 7464894 7483086 25489912 25493500 123051155 123424445 107941893 107924149 106369300 106411824 5724846 110434696 102602545 102581078 102625664 102619381 100841603 107793186 107767843
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