ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100283220	uncharacterized LOC100283220
zma-r.6	100283220	uncharacterized LOC100283220
zma-m.5	100283220	uncharacterized LOC100283220
zma-u.5	100286211	uncharacterized LOC100286211
zma-u.5	100283099	uncharacterized LOC100283099
osa-u.5	4325458	uncharacterized protein At2g39795, mitochondrial
osa-u.5	4340910	uncharacterized protein At2g39795, mitochondrial
ath-u.5	AT2G39795	Mitochondrial glycoprotein family protein
ath-u.5	AT3G55605	Mitochondrial glycoprotein family protein
gma-u.5	100790011	uncharacterized protein At2g39795, mitochondrial
gma-u.5	100809454	MAM33 domain-containing protein
gma-u.5	100818815	uncharacterized LOC100818815
sly-u.5	101257446	uncharacterized protein At2g39795, mitochondrial
sly-u.5	101259779	uncharacterized protein At2g39795, mitochondrial-like
vvi-u.5	100266772	uncharacterized protein At2g39795, mitochondrial
ppo-u.5	7487281	uncharacterized protein At2g39795, mitochondrial
ppo-u.5	7468828	uncharacterized protein At2g39795, mitochondrial
mtr-u.5	25498582	uncharacterized protein At2g39795, mitochondrial
mtr-u.5	11411195	uncharacterized protein At2g39795, mitochondrial

Top 50 coexpressed genes to 100283220 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100283220 (zma-u.5 coexpression data)

CoexMap"100283220"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005759 [list] [network] mitochondrial matrix

(79 genes)

IEA

GO MF

Protein

NP_001149594.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 6, chlo 4

(predict for NP_001149594.1)

Subcellular
localization
TargetP

chlo 7, mito 7

(predict for NP_001149594.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100283220	zma-r.6 for 100283220	zma-m.5 for 100283220	zma-u.5 for 100286211	zma-u.5 for 100283099	osa-u.5 for 4325458	osa-u.5 for 4340910	ath-u.5 for AT2G39795	ath-u.5 for AT3G55605	gma-u.5 for 100790011	gma-u.5 for 100809454	gma-u.5 for 100818815	sly-u.5 for 101257446	sly-u.5 for 101259779	vvi-u.5 for 100266772	ppo-u.5 for 7487281	ppo-u.5 for 7468828	mtr-u.5 for 25498582	mtr-u.5 for 11411195

Ortholog

Ortholog ID: 1142

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC100286211

uncharacterized LOC100283220

uncharacterized protein At2g39795, mitochondrial

uncharacterized protein At2g39795, mitochondrial-like

uncharacterized protein At2g39795, mitochondrial

Mitochondrial glycoprotein family protein

uncharacterized protein At2g39795, mitochondrial

uncharacterized LOC100818815

uncharacterized protein At2g39795, mitochondrial-like

uncharacterized protein At2g39795, mitochondrial

uncharacterized protein At2g39795, mitochondrial-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	2
zma01210	2-Oxocarboxylic acid metabolism	2
zma01230	Biosynthesis of amino acids	2
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	4
tae03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03018	RNA degradation	4
hvu03030	DNA replication	2
hvu03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	4
hvu03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	6
bdi03018	RNA degradation	2
bdi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	3
ath03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	4
gma03008	Ribosome biogenesis in eukaryotes	3
gma00240	Pyrimidine metabolism	2
gma00250	Alanine, aspartate and glutamate metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03020	RNA polymerase	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	3
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	3
bra03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	7
ppo03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	3
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	2
mtr03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	2
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	2
ghi03430	Mismatch repair	2
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00220	Arginine biosynthesis	3
sot00250	Alanine, aspartate and glutamate metabolism	3
sot01230	Biosynthesis of amino acids	2
sot03010	Ribosome	2
sot00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2
nta03030	DNA replication	2
nta03430	Mismatch repair	2
nta03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00514	Other types of O-glycan biosynthesis	3
cre03010	Ribosome	2
cre00600	Sphingolipid metabolism	2
cre00190	Oxidative phosphorylation	2
cre04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

100286211

100283220

8073317

8073318

4325458

123167560

123060053

123409669

123442634

100836936

100824906

830486

100803348

100818815

101259779

101257446

103855648

103846948

100266772

7468828

7487281

25498582

11411195

107935333

107955141

106445365

102592862

102592967

102618890

102608836

107822149

107788385

5717799

5724028

The preparation time of this page was 0.2 [sec].


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	2	2	3	2	1	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100283220 (zma-u.5 coexpression data)

Top 50 enrichment test to 100283220 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**