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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100283372   uncharacterized LOC100283372 
 zma-r.6   100283372   uncharacterized LOC100283372 
 zma-m.5   100283372   uncharacterized LOC100283372 
 osa-u.5   9268604   uncharacterized LOC9268604 
 ath-u.5   PSF1   partner of SLD five 1 
 sly-u.5   101252021   uncharacterized LOC101252021 
 vvi-u.5   100256728   uncharacterized LOC100256728 
 ppo-u.5   18100342   uncharacterized LOC18100342 
 mtr-u.5   25483403   DNA replication complex GINS protein PSF1 
 mtr-u.5   11427223   DNA replication complex GINS protein PSF1 

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Top 50 coexpressed genes to 100283372 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100283372 (zma-u.5 coexpression data)

CoexMap"100283372"


zmaLOC100283372 | Entrez gene ID : 100283372      
Species zma osa ath sly vvi ppo mtr hvu sot tae nta bra cit gma ghi bna bdi sbi cre
Paralog 3 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1902983 [list] [network] DNA strand elongation involved in mitotic DNA replication  (1 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (150 genes)  IEA  
GO CC
GO:0000811 [list] [network] GINS complex  (8 genes)  IEA  
GO MF
Protein NP_001356590.1 [sequence] [blastp]
XP_008668022.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 3,  plas 1,  mito 1,  golg_plas 1,  cyto 1  (predict for NP_001356590.1)
nucl 5,  cyto_nucl 4,  cyto 2,  mito 1,  plas 1,  golg_plas 1  (predict for XP_008668022.1)
Subcellular
localization
TargetP
other 7,  mito 5  (predict for NP_001356590.1)
other 6  (predict for XP_008668022.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100283372

.
zma-r.6
for
100283372

.
zma-m.5
for
100283372

.
osa-u.5
for
9268604

.
ath-u.5
for
PSF1

.
sly-u.5
for
101252021

.
vvi-u.5
for
100256728

.
ppo-u.5
for
18100342

.
mtr-u.5
for
25483403

.
mtr-u.5
for
11427223

.


Ortholog ID: 7862
Species ath sly osa zma bra vvi ppo mtr mtr tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol PSF1 LOC101252021 LOC9268604 LOC100283372 LOC103853275 LOC100256728 LOC18100342 LOC25483403 LOC11427223 LOC123152116 LOC123415194 LOC107940962 LOC107914874 LOC125575308 LOC106423009 CHLRE_03g161050v5 LOC110436362 LOC102581524 LOC102606680 LOC100823089 LOC107791149 LOC107788344
Function* partner of SLD five 1 uncharacterized LOC101252021 uncharacterized LOC9268604 uncharacterized LOC100283372 probable DNA replication complex GINS protein PSF1 uncharacterized LOC100256728 uncharacterized LOC18100342 DNA replication complex GINS protein PSF1 DNA replication complex GINS protein PSF1 DNA replication complex GINS protein PSF1 DNA replication complex GINS protein PSF1 probable DNA replication complex GINS protein PSF1 DNA replication complex GINS protein PSF1 probable DNA replication complex GINS protein PSF1 probable DNA replication complex GINS protein PSF1 uncharacterized protein DNA replication complex GINS protein PSF1-like DNA replication complex GINS protein PSF1 uncharacterized LOC102606680 DNA replication complex GINS protein PSF1 uncharacterized LOC107791149 uncharacterized LOC107788344
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 3
ath03420 Nucleotide excision repair 3
ath03440 Homologous recombination 3
ath03430 Mismatch repair 2
ath03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 3
sly00240 Pyrimidine metabolism 3
sly01232 Nucleotide metabolism 3
sly00230 Purine metabolism 2
sly00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00290 Valine, leucine and isoleucine biosynthesis 2
bra00770 Pantothenate and CoA biosynthesis 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 3
vvi03030 DNA replication 2
vvi03410 Base excision repair 2
vvi03420 Nucleotide excision repair 2
vvi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 5
ppo00240 Pyrimidine metabolism 4
ppo01232 Nucleotide metabolism 4
ppo03430 Mismatch repair 4
ppo00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae00480 Glutathione metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 8
cre03410 Base excision repair 5
cre03420 Nucleotide excision repair 4
cre03430 Mismatch repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 7
nta01232 Nucleotide metabolism 7
nta00230 Purine metabolism 5
nta00480 Glutathione metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 4
nta00240 Pyrimidine metabolism 4
nta00480 Glutathione metabolism 4
nta01232 Nucleotide metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844359 101252021 9268604 100283372 103853275 100256728 18100342 25483403 11427223 123152116 123415194 107940962 107914874 125575308 106423009 5722980 110436362 102581524 102606680 100823089 107791149 107788344
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