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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100283380   elongation factor 1-delta 1 
 zma-r.6   100283380   elongation factor 1-delta 1 
 zma-m.5   100283380   elongation factor 1-delta 1 
 zma-u.5   100282885   elongation factor 1-delta 1 
 osa-u.5   4333079   elongation factor 1-delta 2-like 
 osa-u.5   4343894   elongation factor 1-delta 1-like 
 ath-u.5   AT2G18110   Translation elongation factor EF1B/ribosomal protein S6 family protein 
 ath-u.5   eEF-1Bb1   translation elongation factor EF1B/ribosomal protein S6 family protein 
 gma-u.5   100499878   elongation factor 1-delta 2-like 
 gma-u.5   100777627   elongation factor 1-delta 
 sly-u.5   101247163   elongation factor 1-delta 1 
 sly-u.5   DDTFR10   ripening regulated protein DDTFR10 
 vvi-u.5   100252524   elongation factor 1-delta 
 ppo-u.5   7454547   elongation factor 1-delta 1 
 ppo-u.5   7454706   elongation factor 1-delta 2 
 mtr-u.5   25491521   elongation factor 1-delta 
 mtr-u.5   25488389   elongation factor 1-delta 

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Top 50 coexpressed genes to 100283380 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100283380 (zma-u.5 coexpression data)

CoexMap"100283380"


zmaLOC100283380 | Entrez gene ID : 100283380      
Species zma osa ath gma sly vvi ppo mtr cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 4 2 2 2 2 1 2 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006414 [list] [network] translational elongation  (54 genes)  IEA  
GO CC
GO:0005853 [list] [network] eukaryotic translation elongation factor 1 complex  (3 genes)  IEA  
GO:0005829 [list] [network] cytosol  (983 genes)  IEA  
GO MF
GO:0003746 [list] [network] translation elongation factor activity  (39 genes)  IEA  
GO:0005085 [list] [network] guanyl-nucleotide exchange factor activity  (51 genes)  IEA  
Protein NP_001149753.1 [sequence] [blastp]
XP_008655010.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  cyto_plas 2,  mito 1,  pero 1  (predict for NP_001149753.1)
cyto 4,  chlo 2,  cyto_plas 2,  mito 1,  pero 1  (predict for XP_008655010.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001149753.1)
other 6  (predict for XP_008655010.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100283380

.
zma-r.6
for
100283380

.
zma-m.5
for
100283380

.
zma-u.5
for
100282885

.
osa-u.5
for
4333079

.
osa-u.5
for
4343894

.
ath-u.5
for
AT2G18110

.
ath-u.5
for
eEF-1Bb1

.
gma-u.5
for
100499878

.
gma-u.5
for
100777627

.
sly-u.5
for
101247163

.
sly-u.5
for
DDTFR10

.
vvi-u.5
for
100252524

.
ppo-u.5
for
7454547

.
ppo-u.5
for
7454706

.
mtr-u.5
for
25491521

.
mtr-u.5
for
25488389

.


Ortholog ID: 4680
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sbi sot sot cit bdi bdi nta nta
Symbol AT2G18110 eEF-1Bb1 LOC100777627 LOC100499878 DDTFR10 LOC101247163 LOC4333079 LOC4343894 LOC100282885 LOC100283380 LOC103840528 LOC103835229 LOC100252524 LOC7454547 LOC7454706 LOC25488389 LOC25491521 LOC123052104 LOC123044224 LOC123425324 LOC121219937 LOC107942552 LOC106362443 LOC125578141 LOC8080430 LOC8079183 LOC102593337 LOC102604729 LOC102608130 LOC100836375 LOC100829465 LOC107791787 LOC107819488
Function* Translation elongation factor EF1B/ribosomal protein S6 family protein translation elongation factor EF1B/ribosomal protein S6 family protein elongation factor 1-delta elongation factor 1-delta 2-like ripening regulated protein DDTFR10 elongation factor 1-delta 1 elongation factor 1-delta 2-like elongation factor 1-delta 1-like elongation factor 1-delta 1 elongation factor 1-delta 1 elongation factor 1-delta 1-like elongation factor 1-delta 1 elongation factor 1-delta elongation factor 1-delta 1 elongation factor 1-delta 2 elongation factor 1-delta elongation factor 1-delta elongation factor 1-delta 1 elongation factor 1-delta 1 elongation factor 1-delta 1-like elongation factor 1-delta elongation factor 1-delta elongation factor 1-delta 1 elongation factor 1-delta 1 elongation factor 1-delta 2 elongation factor 1-delta 1 elongation factor 1-delta 1-like elongation factor 1-delta 1 elongation factor 1-delta 2 elongation factor 1-delta 2 elongation factor 1-delta 1 elongation factor 1-delta 1-like elongation factor 1-delta 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
bra03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 8
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 4
bna00240 Pyrimidine metabolism 4
bna00250 Alanine, aspartate and glutamate metabolism 4
bna01240 Biosynthesis of cofactors 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 9
sbi04141 Protein processing in endoplasmic reticulum 3
sbi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00010 Glycolysis / Gluconeogenesis 4
bdi01200 Carbon metabolism 4
bdi01230 Biosynthesis of amino acids 4
bdi03018 RNA degradation 2
bdi04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta03015 mRNA surveillance pathway 5
nta03013 Nucleocytoplasmic transport 4
nta03040 Spliceosome 4
nta03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816323 839903 100777627 100499878 543636 101247163 4333079 4343894 100282885 100283380 103840528 103835229 100252524 7454547 7454706 25488389 25491521 123052104 123044224 123425324 121219937 107942552 106362443 125578141 8080430 8079183 102593337 102604729 102608130 100836375 100829465 107791787 107819488
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