ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100283719	uncharacterized LOC100283719
zma-r.6	100283719	uncharacterized LOC100283719
zma-u.5	103635082	uncharacterized LOC103635082
zma-u.5	100284524	uncharacterized LOC100284524
zma-u.5	100280854	uncharacterized LOC100280854
osa-u.5	4323902	uncharacterized LOC4323902
osa-u.5	4338515	uncharacterized LOC4338515
ath-u.5	PIT1	RING/FYVE/PHD zinc finger superfamily protein
ath-u.5	AT1G02610	RING/FYVE/PHD zinc finger superfamily protein
gma-u.5	100802379	E3 ubiquitin-protein ligase MARCHF8
sly-u.5	101244523	uncharacterized LOC101244523
vvi-u.5	100260678	uncharacterized LOC100260678
ppo-u.5	7491263	uncharacterized LOC7491263
mtr-u.5	11420992	E3 ubiquitin-protein ligase MARCHF7
mtr-u.5	11416802	uncharacterized LOC11416802

Annotation

functional annotation

KEGG

GO BP

GO:0016567 [list] [network] protein ubiquitination

(391 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(3751 genes)

IEA

GO MF

GO:0004842 [list] [network] ubiquitin-protein transferase activity	(430 genes)	IEA
GO:0008270 [list] [network] zinc ion binding	(807 genes)	IEA

Protein

NP_001358890.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, plas 2, E.R. 1, golg 1

(predict for NP_001358890.1)

Subcellular
localization
TargetP

other 8

(predict for NP_001358890.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100283719	zma-r.6 for 100283719	zma-u.5 for 103635082	zma-u.5 for 100284524	zma-u.5 for 100280854	osa-u.5 for 4323902	osa-u.5 for 4338515	ath-u.5 for PIT1	ath-u.5 for AT1G02610	gma-u.5 for 100802379	sly-u.5 for 101244523	vvi-u.5 for 100260678	ppo-u.5 for 7491263	mtr-u.5 for 11420992	mtr-u.5 for 11416802

Ortholog

Ortholog ID: 3828

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

PIT1

Function^*

uncharacterized LOC100280854

uncharacterized LOC100283719

uncharacterized LOC8078178

uncharacterized LOC8061890

uncharacterized LOC4323902

uncharacterized LOC4338515

uncharacterized LOC123052822

uncharacterized LOC123440967

uncharacterized LOC123411318

uncharacterized LOC100839394

RING/FYVE/PHD zinc finger superfamily protein

C4HC3 zinc-finger-like motif-containing protein

uncharacterized LOC101244523

E3 ubiquitin-protein ligase MARCH8

uncharacterized LOC103844575

uncharacterized LOC100260678

uncharacterized LOC7491263

E3 ubiquitin-protein ligase MARCHF7

uncharacterized LOC11416802

E3 ubiquitin-protein ligase MARCHF8

uncharacterized LOC102602499

uncharacterized LOC102627127

uncharacterized LOC107805047

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00380	Tryptophan metabolism	2
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	3
sbi04075	Plant hormone signal transduction	3
sbi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04145	Phagosome	2
hvu04517	IgSF CAM signaling	2
hvu04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	3
hvu03250	Viral life cycle - HIV-1	2
hvu03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	2
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04517	IgSF CAM signaling	4
ghi04814	Motor proteins	4
ghi00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04517	IgSF CAM signaling	2
ghi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	3
nta04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

100280854

100283719

8078178

8061890

4323902

4338515

123052822

123440967

123411318

100839394

837915

828146

100527142

101244523

103836778

103844575

100260678

7491263

11420992

11416802

107946028

107925568

106435593

106426658

102602499

102627127

107805047

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100283719 (zma-u.5 coexpression data)

Top 50 enrichment test to 100283719 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	2	2	1	1	1	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100283719 (zma-u.5 coexpression data)

Top 50 enrichment test to 100283719 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**