ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100283999	uncharacterized LOC100283999
zma-r.6	100283999	uncharacterized LOC100283999
zma-m.5	100283999	uncharacterized LOC100283999
zma-u.5	100381473	uncharacterized LOC100381473
zma-u.5	100285667	maf-like protein CV_0124
sbi-r.1	8056851	maf-like protein DDB_G0281937
sbi-r.1	8063347	maf-like protein DDB_G0281937
sbi-r.1	8058586	maf-like protein DDB_G0281937
osa-u.5	9266255	uncharacterized LOC9266255
osa-u.5	9270576	uncharacterized LOC9270576
osa-u.5	4350701	uncharacterized LOC4350701
tae-r.2	123047324	7-methyl-GTP pyrophosphatase
hvu-r.1	123449241	7-methyl-GTP pyrophosphatase-like
hvu-r.1	123433033	7-methyl-GTP pyrophosphatase-like
bdi-r.1	100843710	maf-like protein DDB_G0281937
bdi-r.1	100839032	maf-like protein DDB_G0281937
ath-u.5	AT2G25500	Inosine triphosphate pyrophosphatase family protein
ath-u.5	AT5G42770	Maf-like protein
ath-u.5	AT5G66550	Maf-like protein
gma-u.5	100792444	maf-like protein DDB_G0281937-like
gma-u.5	100802151	7-methyl-GTP pyrophosphatase
gma-u.5	100820329	7-methyl-GTP pyrophosphatase
sly-u.5	101259208	uncharacterized LOC101259208
sly-u.5	101265919	uncharacterized LOC101265919
bra-r.6	103837694	7-methyl-GTP pyrophosphatase
bra-r.6	103828013	7-methyl-GTP pyrophosphatase
vvi-u.5	100242088	uncharacterized LOC100242088
vvi-u.5	100242728	uncharacterized LOC100242728
ppo-u.5	7455717	uncharacterized LOC7455717
mtr-u.5	11413766	7-methyl-GTP pyrophosphatase
mtr-u.5	25482144	7-methyl-GTP pyrophosphatase
ghi-r.1	107957573	7-methyl-GTP pyrophosphatase
ghi-r.1	121215272	7-methyl-GTP pyrophosphatase
ghi-r.1	107910188	7-methyl-GTP pyrophosphatase
bna-r.1	125577770	7-methyl-GTP pyrophosphatase-like
bna-r.1	106371025	7-methyl-GTP pyrophosphatase-like
bna-r.1	106349533	7-methyl-GTP pyrophosphatase
sot-r.1	102578264	maf-like protein DDB_G0281937
sot-r.1	102592745	maf-like protein DDB_G0281937
cit-r.1	102627985	uncharacterized LOC102627985
cit-r.1	102611180	uncharacterized LOC102611180
nta-r.1	107821710	uncharacterized LOC107821710
nta-r.1	107800667	uncharacterized LOC107800667
nta-r.1	107784166	uncharacterized LOC107784166
cre-r.1	CHLRE_12g514800v5	uncharacterized protein

Top 50 coexpressed genes to 100283999 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100283999 (zma-u.5 coexpression data)

CoexMap"100283999"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0047429 [list] [network] nucleoside triphosphate diphosphatase activity

(13 genes)

IEA

Protein

NP_001150369.2 [sequence] [blastp]
XP_020408030.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 4, chlo_mito 4, chlo 4	(predict for NP_001150369.2)
mito 7, chlo 1, cyto 1, plas 1, cyto_plas 1	(predict for XP_020408030.1)

Subcellular
localization
TargetP

mito 4, chlo 3	(predict for NP_001150369.2)
mito 4, chlo 3	(predict for XP_020408030.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100283999	zma-r.6 for 100283999	zma-m.5 for 100283999	zma-u.5 for 100381473	zma-u.5 for 100285667	sbi-r.1 for 8056851	sbi-r.1 for 8063347	sbi-r.1 for 8058586	osa-u.5 for 9266255	osa-u.5 for 9270576	osa-u.5 for 4350701	tae-r.2 for 123047324	hvu-r.1 for 123449241	hvu-r.1 for 123433033	bdi-r.1 for 100843710	bdi-r.1 for 100839032	ath-u.5 for AT2G25500	ath-u.5 for AT5G42770	ath-u.5 for AT5G66550	gma-u.5 for 100792444	gma-u.5 for 100802151	gma-u.5 for 100820329	sly-u.5 for 101259208	sly-u.5 for 101265919	bra-r.6 for 103837694	bra-r.6 for 103828013	vvi-u.5 for 100242088	vvi-u.5 for 100242728	ppo-u.5 for 7455717	mtr-u.5 for 11413766	mtr-u.5 for 25482144	ghi-r.1 for 107957573	ghi-r.1 for 121215272	ghi-r.1 for 107910188	bna-r.1 for 125577770	bna-r.1 for 106371025	bna-r.1 for 106349533	sot-r.1 for 102578264	sot-r.1 for 102592745	cit-r.1 for 102627985	cit-r.1 for 102611180	nta-r.1 for 107821710	nta-r.1 for 107800667	nta-r.1 for 107784166	cre-r.1 for CHLRE_12g514800v5

Ortholog

Ortholog ID: 2203

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC100283999

uncharacterized LOC100381473

maf-like protein CV_0124

maf-like protein DDB_G0281937

uncharacterized LOC9266255

uncharacterized LOC9270576

uncharacterized LOC4350701

7-methyl-GTP pyrophosphatase

7-methyl-GTP pyrophosphatase-like

maf-like protein DDB_G0281937

Inosine triphosphate pyrophosphatase family protein

Maf-like protein

maf-like protein DDB_G0281937-like

7-methyl-GTP pyrophosphatase

uncharacterized LOC101259208

uncharacterized LOC101265919

7-methyl-GTP pyrophosphatase

uncharacterized LOC100242088

uncharacterized LOC100242728

uncharacterized LOC7455717

7-methyl-GTP pyrophosphatase

7-methyl-GTP pyrophosphatase-like

maf-like protein DDB_G0281937

uncharacterized LOC102627985

uncharacterized LOC102611180

uncharacterized LOC107821710

uncharacterized LOC107800667

uncharacterized LOC107766389

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00970	Aminoacyl-tRNA biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	5
tae04145	Phagosome	5
tae03050	Proteasome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00480	Glutathione metabolism	2
tae00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04148	Efferocytosis	3
tae03050	Proteasome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01240	Biosynthesis of cofactors	4
bdi00970	Aminoacyl-tRNA biosynthesis	4
bdi00860	Porphyrin metabolism	3
bdi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2
bdi00190	Oxidative phosphorylation	2
bdi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00460	Cyanoamino acid metabolism	2
ath00500	Starch and sucrose metabolism	2
ath00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00460	Cyanoamino acid metabolism	2
ath00500	Starch and sucrose metabolism	2
ath00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03440	Homologous recombination	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00970	Aminoacyl-tRNA biosynthesis	2
gma00630	Glyoxylate and dicarboxylate metabolism	2
gma00650	Butanoate metabolism	2
gma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00860	Porphyrin metabolism	2
gma01240	Biosynthesis of cofactors	2
gma00630	Glyoxylate and dicarboxylate metabolism	2
gma00650	Butanoate metabolism	2
gma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00710	Carbon fixation by Calvin cycle	2
vvi01200	Carbon metabolism	2
vvi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3
ppo00190	Oxidative phosphorylation	2
ppo00053	Ascorbate and aldarate metabolism	2
ppo00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	6
mtr03040	Spliceosome	3
mtr03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01200	Carbon metabolism	4
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00030	Pentose phosphate pathway	2
ghi00051	Fructose and mannose metabolism	2
ghi00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01200	Carbon metabolism	4
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00030	Pentose phosphate pathway	2
ghi00051	Fructose and mannose metabolism	2
ghi00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00970	Aminoacyl-tRNA biosynthesis	3
cit00860	Porphyrin metabolism	2
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	4
nta00030	Pentose phosphate pathway	2
nta00710	Carbon fixation by Calvin cycle	2
nta01200	Carbon metabolism	2
nta01230	Biosynthesis of amino acids	2

Expression

Expression pattern

Entrez Gene ID^*

100283999

100381473

100285667

8056851

8063347

8058586

9266255

9270576

4350701

123085094

123089945

123098163

123449241

123433033

100843710

100839032

817088

834287

836787

100792444

100802151

100820329

101259208

101265919

103837694

103828013

100242088

100242728

7455717

11413766

25482144

121215272

107887122

107909402

125577770

106366277

102578264

102592745

102627985

102611180

107821710

107800667

107766389

5728524

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Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	5	3	3	1	2	2	3	3	2	2	2	1	2	3	3	2	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100283999 (zma-u.5 coexpression data)

Top 50 enrichment test to 100283999 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**