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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100284817   uncharacterized LOC100284817 
 zma-r.6   100284817   uncharacterized LOC100284817 
 osa-u.5   9270715   phosphoserine aminotransferase 1, chloroplastic 
 ath-u.5   AT2G17630   Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 
 ath-u.5   PSAT   phosphoserine aminotransferase 
 gma-u.5   100779355   phosphoserine aminotransferase 1, chloroplastic 
 gma-u.5   100795286   phosphoserine aminotransferase 2, chloroplastic 
 gma-u.5   100798600   phosphoserine aminotransferase 1, chloroplastic 
 sly-u.5   101254553   phosphoserine aminotransferase 2, chloroplastic-like 
 vvi-u.5   100854216   phosphoserine aminotransferase 2, chloroplastic 
 ppo-u.5   7492121   phosphoserine aminotransferase 2, chloroplastic 
 mtr-u.5   11443166   phosphoserine aminotransferase 2, chloroplastic 

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Top 50 coexpressed genes to 100284817 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100284817 (zma-u.5 coexpression data)

CoexMap"100284817"


zmaLOC100284817 | Entrez gene ID : 100284817      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 2 3 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00260 [list] [network] Glycine, serine and threonine metabolism (89 genes)
zma00270 [list] [network] Cysteine and methionine metabolism (144 genes)
zma00750 [list] [network] Vitamin B6 metabolism (15 genes)
zma01200 [list] [network] Carbon metabolism (344 genes)
zma01230 [list] [network] Biosynthesis of amino acids (293 genes)
zma01240 [list] [network] Biosynthesis of cofactors (295 genes)
GO BP
GO:0006564 [list] [network] L-serine biosynthetic process  (6 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (118 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5465 genes)  IEA  
GO MF
GO:0004648 [list] [network] O-phospho-L-serine:2-oxoglutarate aminotransferase activity  (1 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (116 genes)  IEA  
Protein NP_001151184.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_001151184.2)
Subcellular
localization
TargetP
chlo 7,  mito 3  (predict for NP_001151184.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100284817

.
zma-r.6
for
100284817

.
osa-u.5
for
9270715

.
ath-u.5
for
AT2G17630

.
ath-u.5
for
PSAT

.
gma-u.5
for
100779355

.
gma-u.5
for
100795286

.
gma-u.5
for
100798600

.
sly-u.5
for
101254553

.
vvi-u.5
for
100854216

.
ppo-u.5
for
7492121

.
mtr-u.5
for
11443166

.


Ortholog ID: 7153
Species ath ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol PSAT AT2G17630 LOC100779355 LOC100798600 LOC101254553 LOC9270715 LOC100284817 LOC103834946 LOC103837814 LOC100854216 LOC7492121 LOC11443166 LOC123084884 LOC123098468 LOC123449487 LOC107955090 LOC107955620 LOC106436619 LOC106401135 CHLRE_07g331550v5 LOC110431746 LOC102591400 LOC102627208 LOC100842280 LOC107777146 LOC107804364
Function* phosphoserine aminotransferase Pyridoxal phosphate (PLP)-dependent transferases superfamily protein phosphoserine aminotransferase 1, chloroplastic phosphoserine aminotransferase 1, chloroplastic phosphoserine aminotransferase 2, chloroplastic-like phosphoserine aminotransferase 1, chloroplastic uncharacterized LOC100284817 phosphoserine aminotransferase 1, chloroplastic phosphoserine aminotransferase 2, chloroplastic phosphoserine aminotransferase 2, chloroplastic phosphoserine aminotransferase 2, chloroplastic phosphoserine aminotransferase 2, chloroplastic phosphoserine aminotransferase 1, chloroplastic phosphoserine aminotransferase 1, chloroplastic phosphoserine aminotransferase 1, chloroplastic-like phosphoserine aminotransferase 2, chloroplastic phosphoserine aminotransferase 2, chloroplastic phosphoserine aminotransferase 1, chloroplastic phosphoserine aminotransferase 2, chloroplastic uncharacterized protein phosphoserine aminotransferase 2, chloroplastic-like phosphoserine aminotransferase 2, chloroplastic phosphoserine aminotransferase 2, chloroplastic-like phosphoserine aminotransferase 1, chloroplastic phosphoserine aminotransferase 2, chloroplastic-like phosphoserine aminotransferase 2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 14
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
ath00260 Glycine, serine and threonine metabolism 6
ath00270 Cysteine and methionine metabolism 6
ath01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
ath01200 Carbon metabolism 3
ath00270 Cysteine and methionine metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma00260 Glycine, serine and threonine metabolism 3
gma00270 Cysteine and methionine metabolism 3
gma00750 Vitamin B6 metabolism 3
gma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma00260 Glycine, serine and threonine metabolism 2
gma00270 Cysteine and methionine metabolism 2
gma00750 Vitamin B6 metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 5
sly00270 Cysteine and methionine metabolism 4
sly01230 Biosynthesis of amino acids 4
sly00190 Oxidative phosphorylation 3
sly01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 7
osa01230 Biosynthesis of amino acids 7
osa00030 Pentose phosphate pathway 3
osa00260 Glycine, serine and threonine metabolism 3
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 10
zma01230 Biosynthesis of amino acids 9
zma00670 One carbon pool by folate 7
zma01240 Biosynthesis of cofactors 5
zma01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 12
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
bra00260 Glycine, serine and threonine metabolism 6
bra00270 Cysteine and methionine metabolism 4
bra01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 9
bra01230 Biosynthesis of amino acids 8
bra00260 Glycine, serine and threonine metabolism 8
bra00270 Cysteine and methionine metabolism 5
bra01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 13
vvi01230 Biosynthesis of amino acids 13
vvi00010 Glycolysis / Gluconeogenesis 11
vvi00710 Carbon fixation by Calvin cycle 7
vvi00030 Pentose phosphate pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00270 Cysteine and methionine metabolism 10
ppo01230 Biosynthesis of amino acids 9
ppo01200 Carbon metabolism 7
ppo00670 One carbon pool by folate 6
ppo01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 3
mtr00270 Cysteine and methionine metabolism 3
mtr01230 Biosynthesis of amino acids 3
mtr00061 Fatty acid biosynthesis 2
mtr00780 Biotin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 10
tae00260 Glycine, serine and threonine metabolism 7
tae00270 Cysteine and methionine metabolism 6
tae01200 Carbon metabolism 6
tae00750 Vitamin B6 metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 12
tae00260 Glycine, serine and threonine metabolism 8
tae00270 Cysteine and methionine metabolism 6
tae01200 Carbon metabolism 6
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 7
hvu01200 Carbon metabolism 6
hvu00270 Cysteine and methionine metabolism 4
hvu00260 Glycine, serine and threonine metabolism 4
hvu00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 8
ghi00670 One carbon pool by folate 6
ghi00260 Glycine, serine and threonine metabolism 2
ghi00750 Vitamin B6 metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 8
ghi00670 One carbon pool by folate 6
ghi00190 Oxidative phosphorylation 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 14
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
bna00260 Glycine, serine and threonine metabolism 7
bna00270 Cysteine and methionine metabolism 5
bna00750 Vitamin B6 metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 12
bna01230 Biosynthesis of amino acids 12
bna00270 Cysteine and methionine metabolism 11
bna01200 Carbon metabolism 11
bna00750 Vitamin B6 metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 4
cre00500 Starch and sucrose metabolism 4
cre01230 Biosynthesis of amino acids 3
cre00030 Pentose phosphate pathway 3
cre00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 6
sbi00260 Glycine, serine and threonine metabolism 4
sbi00270 Cysteine and methionine metabolism 4
sbi01230 Biosynthesis of amino acids 4
sbi00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 6
sot00670 One carbon pool by folate 5
sot01230 Biosynthesis of amino acids 5
sot01240 Biosynthesis of cofactors 4
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 8
cit01230 Biosynthesis of amino acids 8
cit00270 Cysteine and methionine metabolism 4
cit00020 Citrate cycle (TCA cycle) 3
cit00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 7
bdi01200 Carbon metabolism 5
bdi00260 Glycine, serine and threonine metabolism 3
bdi00270 Cysteine and methionine metabolism 3
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 13
nta01200 Carbon metabolism 10
nta00670 One carbon pool by folate 9
nta00270 Cysteine and methionine metabolism 9
nta01240 Biosynthesis of cofactors 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 13
nta01200 Carbon metabolism 10
nta00670 One carbon pool by folate 9
nta00270 Cysteine and methionine metabolism 9
nta01240 Biosynthesis of cofactors 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829715 816270 100779355 100798600 101254553 9270715 100284817 103834946 103837814 100854216 7492121 11443166 123084884 123098468 123449487 107955090 107955620 106436619 106401135 5716096 110431746 102591400 102627208 100842280 107777146 107804364
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