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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100285619   nucleic acid binding protein 
 zma-r.6   100285619   nucleic acid binding protein 
 osa-u.5   4327782   RNA-binding KH domain-containing protein RCF3 
 gma-u.5   100785136   KH domain-containing protein HEN4 
 gma-u.5   100777433   KH domain-containing protein HEN4 
 sly-u.5   101245756   RNA-binding KH domain-containing protein RCF3 
 vvi-u.5   100267715   KH domain-containing protein HEN4 
 ppo-u.5   7467235   KH domain-containing protein HEN4 
 mtr-u.5   11436115   KH domain-containing protein HEN4 

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Top 50 coexpressed genes to 100285619 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100285619 (zma-u.5 coexpression data)

CoexMap"100285619"


zmaLOC100285619 | Entrez gene ID : 100285619      
Species zma osa gma sly vvi ppo mtr bdi hvu bra cit bna ath sbi ghi sot nta cre tae
Paralog 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
Protein NP_001151982.1 [sequence] [blastp]
XP_008655097.1 [sequence] [blastp]
XP_008655099.1 [sequence] [blastp]
XP_008655100.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo_mito 4,  chlo 2  (predict for NP_001151982.1)
mito 6,  chlo_mito 4,  chlo 2  (predict for XP_008655097.1)
mito 6,  chlo_mito 4,  chlo 2  (predict for XP_008655099.1)
mito 6,  chlo_mito 4,  chlo 2  (predict for XP_008655100.1)
Subcellular
localization
TargetP
other 3,  mito 3  (predict for NP_001151982.1)
other 3,  mito 3  (predict for XP_008655097.1)
other 3,  mito 3  (predict for XP_008655099.1)
other 3,  mito 3  (predict for XP_008655100.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100285619
zma-r.6
for
100285619
osa-u.5
for
4327782
gma-u.5
for
100785136
gma-u.5
for
100777433
sly-u.5
for
101245756
vvi-u.5
for
100267715
ppo-u.5
for
7467235
mtr-u.5
for
11436115


Ortholog ID: 12070
Species zma sbi osa tae tae hvu bdi gma gma sly vvi ppo mtr ghi ghi sot cit nta nta cre
Symbol LOC100285619 LOC8078086 LOC4327782 LOC123077906 LOC123060833 LOC123443288 LOC100821190 LOC100777433 LOC100785136 LOC101245756 LOC100267715 LOC7467235 LOC11436115 LOC107930579 LOC107907289 LOC102597985 LOC102619376 LOC107791404 LOC107774425 CHLRE_17g707400v5
Function* nucleic acid binding protein KH domain-containing protein HEN4 RNA-binding KH domain-containing protein RCF3 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4-like KH domain-containing protein At4g18375 KH domain-containing protein HEN4 KH domain-containing protein HEN4 RNA-binding KH domain-containing protein RCF3 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein At4g18375-like RNA-binding KH domain-containing protein RCF3-like RNA-binding KH domain-containing protein RCF3-like RNA-binding KH domain-containing protein RCF3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03040 Spliceosome 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
bdi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 5
gma01230 Biosynthesis of amino acids 4
gma00260 Glycine, serine and threonine metabolism 2
gma00261 Monobactam biosynthesis 2
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 8
ghi03040 Spliceosome 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 8
ghi03040 Spliceosome 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 4
cit03018 RNA degradation 3
cit03013 Nucleocytoplasmic transport 3
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 4
nta04120 Ubiquitin mediated proteolysis 2
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03050 Proteasome 3
nta03013 Nucleocytoplasmic transport 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100285619 8078086 4327782 123077906 123060833 123443288 100821190 100777433 100785136 101245756 100267715 7467235 11436115 107930579 107907289 102597985 102619376 107791404 107774425 66056933
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