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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100286166   uncharacterized LOC100286166 
 zma-r.6   100286166   uncharacterized LOC100286166 
 zma-m.5   100286166   uncharacterized LOC100286166 
 zma-u.5   103635500   RNA-binding protein BRN1 
 zma-u.5   100274164   uncharacterized LOC100274164 
 osa-u.5   4344194   RNA-binding protein BRN1 
 osa-u.5   4326538   RNA-binding protein BRN1 
 osa-u.5   4338600   RNA-binding protein BRN1 
 ath-u.5   RBP-DR1   RNA-binding protein-defense related 1 
 ath-u.5   AT1G03457   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100813239   RNA-binding protein BRN1 
 gma-u.5   100807662   RNA-binding protein BRN1 
 gma-u.5   100796156   RNA-binding protein BRN1 
 sly-u.5   101263462   RNA-binding protein BRN1 
 vvi-u.5   100257891   RNA-binding protein BRN1 
 ppo-u.5   7458240   RNA-binding protein BRN1 
 ppo-u.5   7466259   RNA-binding protein BRN1 
 mtr-u.5   25499577   RNA-binding protein BRN1 

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Top 50 coexpressed genes to 100286166 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100286166 (zma-u.5 coexpression data)

CoexMap"100286166"


zmaLOC100286166 | Entrez gene ID : 100286166      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 2 3 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (614 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
Protein NP_001359323.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  chlo 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001359323.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001359323.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100286166

.
zma-r.6
for
100286166

.
zma-m.5
for
100286166

.
zma-u.5
for
103635500

.
zma-u.5
for
100274164

.
osa-u.5
for
4344194

.
osa-u.5
for
4326538

.
osa-u.5
for
4338600

.
ath-u.5
for
RBP-DR1

.
ath-u.5
for
AT1G03457

.
gma-u.5
for
100813239

.
gma-u.5
for
100807662

.
gma-u.5
for
100796156

.
sly-u.5
for
101263462

.
vvi-u.5
for
100257891

.
ppo-u.5
for
7458240

.
ppo-u.5
for
7466259

.
mtr-u.5
for
25499577

.


Ortholog ID: 3362
Species ath ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol AT1G03457 RBP-DR1 LOC100776362 LOC100813239 LOC101263462 LOC4344194 LOC4326538 LOC103635500 LOC100286166 LOC103868177 LOC103844504 LOC100257891 LOC7466259 LOC7458240 LOC25499577 LOC123130186 LOC123063372 LOC123440285 LOC123445415 LOC107930136 LOC107936848 LOC106397716 LOC111200801 CHLRE_03g177200v5 LOC8055824 LOC110434187 LOC102593664 LOC102604979 LOC102623068 LOC100846087 LOC100822623 LOC107812984 LOC107812555
Function* RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding protein-defense related 1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 uncharacterized LOC100286166 RNA-binding protein BRN1 RNA-binding protein BRN2 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1-like RNA-binding protein BRN1-like RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN2 RNA-binding protein BRN1-like uncharacterized protein RNA-binding protein BRN1 RNA-binding protein BRN1-like RNA-binding protein BRN1 RNA-binding protein BRN1-like RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1-like RNA-binding protein BRN1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 2
ath04148 Efferocytosis 2
ath04517 IgSF CAM signaling 2
ath04518 Integrin signaling 2
ath04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04517 IgSF CAM signaling 3
ath05100 Bacterial invasion of epithelial cells 3
ath04145 Phagosome 2
ath04148 Efferocytosis 2
ath04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04145 Phagosome 2
gma04148 Efferocytosis 2
gma04517 IgSF CAM signaling 2
gma04518 Integrin signaling 2
gma04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04145 Phagosome 2
gma04148 Efferocytosis 2
gma04517 IgSF CAM signaling 2
gma04518 Integrin signaling 2
gma04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00600 Sphingolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 3
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04145 Phagosome 7
mtr04517 IgSF CAM signaling 7
mtr04814 Motor proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 3
tae00511 Other glycan degradation 3
tae00513 Various types of N-glycan biosynthesis 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae00531 Glycosaminoglycan degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 4
sbi01230 Biosynthesis of amino acids 4
sbi01212 Fatty acid metabolism 3
sbi04146 Peroxisome 3
sbi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00051 Fructose and mannose metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit00350 Tyrosine metabolism 3
cit00360 Phenylalanine metabolism 3
cit00380 Tryptophan metabolism 3
cit00901 Indole alkaloid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 4
nta01232 Nucleotide metabolism 4
nta01240 Biosynthesis of cofactors 4
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 7
nta04130 SNARE interactions in vesicular transport 2
nta03060 Protein export 2
nta04145 Phagosome 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839497 828090 100776362 100813239 101263462 4344194 4326538 103635500 100286166 103868177 103844504 100257891 7466259 7458240 25499577 123130186 123063372 123440285 123445415 107930136 107936848 106397716 111200801 5728836 8055824 110434187 102593664 102604979 102623068 100846087 100822623 107812984 107812555
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