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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100286258   indole-3-glycerol phosphate synthase 
 zma-r.6   100286258   indole-3-glycerol phosphate synthase 
 zma-u.5   100272983   Indole-3-glycerol phosphate synthase chloroplastic 
 osa-u.5   4345257   indole-3-glycerol phosphate synthase, chloroplastic 
 osa-u.5   4346529   uncharacterized LOC4346529 

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Top 50 coexpressed genes to 100286258 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100286258 (zma-u.5 coexpression data)

CoexMap"100286258"


zmaLOC100286258 | Entrez gene ID : 100286258      
Species zma osa tae mtr bdi vvi sbi ppo bna sly nta cre sot hvu ath ghi gma cit bra
Paralog 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (59 genes)
zma01230 [list] [network] Biosynthesis of amino acids (293 genes)
GO BP
GO:0000162 [list] [network] L-tryptophan biosynthetic process  (28 genes)  IEA  
GO:0006568 [list] [network] L-tryptophan metabolic process  (33 genes)  IEA  
GO CC
GO MF
GO:0004425 [list] [network] indole-3-glycerol-phosphate synthase activity  (3 genes)  IEA  
GO:0004640 [list] [network] phosphoribosylanthranilate isomerase activity  (5 genes)  IEA  
Protein NP_001168869.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  vacu 1  (predict for NP_001168869.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001168869.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100286258

.
zma-r.6
for
100286258

.
zma-u.5
for
100272983

.
osa-u.5
for
4345257

.
osa-u.5
for
4346529

.


Ortholog ID: 13302
Species osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC4346529 LOC4345257 LOC100286258 LOC100272983 LOC123159904 LOC123106921 LOC123398507 LOC123407514 LOC8073231 LOC8084507 LOC100842503 LOC100839441
Function* uncharacterized LOC4346529 indole-3-glycerol phosphate synthase, chloroplastic indole-3-glycerol phosphate synthase Indole-3-glycerol phosphate synthase chloroplastic indole-3-glycerol phosphate synthase, chloroplastic indole-3-glycerol phosphate synthase, chloroplastic indole-3-glycerol phosphate synthase, chloroplastic-like indole-3-glycerol phosphate synthase, chloroplastic-like indole-3-glycerol phosphate synthase, chloroplastic indole-3-glycerol phosphate synthase, chloroplastic indole-3-glycerol phosphate synthase, chloroplastic indole-3-glycerol phosphate synthase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
osa01230 Biosynthesis of amino acids 6
osa00260 Glycine, serine and threonine metabolism 2
osa00350 Tyrosine metabolism 2
osa00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 10
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
osa00260 Glycine, serine and threonine metabolism 3
osa00380 Tryptophan metabolism 3
osa00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00402 Benzoxazinoid biosynthesis 9
zma00999 Biosynthesis of various plant secondary metabolites 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 11
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
zma00270 Cysteine and methionine metabolism 4
zma00450 Selenocompound metabolism 3
zma00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 11
tae01230 Biosynthesis of amino acids 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
tae01230 Biosynthesis of amino acids 6
tae00402 Benzoxazinoid biosynthesis 3
tae00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00350 Tyrosine metabolism 7
hvu00360 Phenylalanine metabolism 7
hvu00380 Tryptophan metabolism 7
hvu00901 Indole alkaloid biosynthesis 7
hvu00950 Isoquinoline alkaloid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 7
hvu00220 Arginine biosynthesis 3
hvu00250 Alanine, aspartate and glutamate metabolism 3
hvu00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
hvu00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
sbi01230 Biosynthesis of amino acids 8
sbi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
sbi01230 Biosynthesis of amino acids 9
sbi00941 Flavonoid biosynthesis 3
sbi00260 Glycine, serine and threonine metabolism 2
sbi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 8
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
bdi00260 Glycine, serine and threonine metabolism 3
bdi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 8
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
bdi00480 Glutathione metabolism 3
bdi00260 Glycine, serine and threonine metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4346529 4345257 100286258 100272983 123159904 123106921 123398507 123407514 8073231 8084507 100842503 100839441
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