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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100305776   uncharacterized LOC100305776 
 gma-r.7   100305776   uncharacterized LOC100305776 
 gma-u.5   100306487   protein CURVATURE THYLAKOID 1C-like 
 mtr-u.5   25491409   protein CURVATURE THYLAKOID 1C, chloroplastic 
 ppo-u.5   7470562   protein CURVATURE THYLAKOID 1C, chloroplastic 
 ppo-u.5   7483535   protein CURVATURE THYLAKOID 1C, chloroplastic 
 ath-u.5   AT1G52220   CURVATURE THYLAKOID protein 
 vvi-u.5   100258354   protein CURVATURE THYLAKOID 1C, chloroplastic 
 sly-u.5   101249276   protein CURVATURE THYLAKOID 1C, chloroplastic 
 osa-u.5   4327018   protein CURVATURE THYLAKOID 1C, chloroplastic 
 zma-u.5   103636627   protein CURVATURE THYLAKOID 1C, chloroplastic 

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Top 50 coexpressed genes to 100305776 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100305776 (gma-u.5 coexpression data)

CoexMap"100305776"


gmaLOC100305776 | Entrez gene ID : 100305776      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (205 genes)  IEA  
GO:0009579 [list] [network] thylakoid  (327 genes)  IEA  
GO MF
Protein NP_001236517.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  vacu 1  (predict for NP_001236517.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001236517.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100305776

.
gma-r.7
for
100305776

.
gma-u.5
for
100306487

.
mtr-u.5
for
25491409

.
ppo-u.5
for
7470562

.
ppo-u.5
for
7483535

.
ath-u.5
for
AT1G52220

.
vvi-u.5
for
100258354

.
sly-u.5
for
101249276

.
osa-u.5
for
4327018

.
zma-u.5
for
103636627

.


Ortholog ID: 10513
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G52220 LOC100306487 LOC100305776 LOC101249276 LOC4327018 LOC103636627 LOC103871228 LOC100258354 LOC7483535 LOC7470562 LOC25491409 LOC123079239 LOC123062125 LOC123444465 LOC107914096 LOC107895676 LOC106390577 LOC125588733 LOC8079228 LOC102606339 LOC102617418 LOC100826133 LOC107830633 LOC107800499
Function* CURVATURE THYLAKOID protein protein CURVATURE THYLAKOID 1C-like uncharacterized LOC100305776 protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic-like protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic-like protein CURVATURE THYLAKOID 1C, chloroplastic-like protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic-like protein CURVATURE THYLAKOID 1C, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 12
ath00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 3
gma00195 Photosynthesis 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 4
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 4
osa00710 Carbon fixation by Calvin cycle 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 11
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 11
vvi00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00860 Porphyrin metabolism 4
ppo01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 5
mtr03010 Ribosome 4
mtr00710 Carbon fixation by Calvin cycle 3
mtr01230 Biosynthesis of amino acids 3
mtr00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 11
tae01200 Carbon metabolism 11
tae00195 Photosynthesis 3
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 6
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 6
hvu00710 Carbon fixation by Calvin cycle 5
hvu00196 Photosynthesis - antenna proteins 4
hvu01230 Biosynthesis of amino acids 4
hvu00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 4
sot00010 Glycolysis / Gluconeogenesis 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 6
bdi01200 Carbon metabolism 5
bdi00710 Carbon fixation by Calvin cycle 4
bdi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 5
nta00190 Oxidative phosphorylation 3
nta03010 Ribosome 2
nta00260 Glycine, serine and threonine metabolism 2
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 4
nta00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841652 100306487 100305776 101249276 4327018 103636627 103871228 100258354 7483535 7470562 25491409 123079239 123062125 123444465 107914096 107895676 106390577 125588733 8079228 102606339 102617418 100826133 107830633 107800499
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