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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100305959   uncharacterized LOC100305959 
 gma-r.7   100305959   uncharacterized LOC100305959 
 gma-m.5   100305959   uncharacterized LOC100305959 
 gma-u.5   100806490   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 mtr-u.5   11423900   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 ppo-u.5   7483265   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 ath-u.5   EDA3   DnaJ/Hsp40 cysteine-rich domain superfamily protein 
 vvi-u.5   100241679   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 sly-u.5   101267437   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 osa-u.5   4345779   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like 

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Top 50 coexpressed genes to 100305959 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100305959 (gma-u.5 coexpression data)

CoexMap"100305959"


gmaLOC100305959 | Entrez gene ID : 100305959      
Species gma mtr ppo ath vvi sly osa sbi nta bra cre hvu cit bdi sot zma tae bna ghi
Paralog 4 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048564 [list] [network] photosystem I assembly  (15 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1168 genes)  IEA  
GO MF
GO:0047134 [list] [network] protein-disulfide reductase [NAD(P)H] activity  (16 genes)  IEA  
Protein NP_001235527.1 [sequence] [blastp]
XP_006588378.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 2,  extr 1,  vacu 1,  cyto_nucl 1,  nucl_plas 1  (predict for NP_001235527.1)
mito 5,  chlo 1,  vacu 1,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for XP_006588378.1)
Subcellular
localization
TargetP
mito 4  (predict for NP_001235527.1)
chlo 9  (predict for XP_006588378.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100305959

.
gma-r.7
for
100305959

.
gma-m.5
for
100305959

.
gma-u.5
for
100806490

.
mtr-u.5
for
11423900

.
ppo-u.5
for
7483265

.
ath-u.5
for
EDA3

.
vvi-u.5
for
100241679

.
sly-u.5
for
101267437

.
osa-u.5
for
4345779

.


Ortholog ID: 6828
Species ath gma gma sly osa bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol EDA3 LOC100305959 LOC100806490 LOC101267437 LOC4345779 LOC103865361 LOC103867412 LOC100241679 LOC7483265 LOC11423900 LOC123043356 LOC123051210 LOC123424551 LOC107914283 LOC107913392 LOC106447213 LOC125600628 CHLRE_11g475850v5 LOC8083511 LOC102581658 LOC102618023 LOC100825738 LOC107770914 LOC107824783
Function* DnaJ/Hsp40 cysteine-rich domain superfamily protein uncharacterized LOC100305959 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like uncharacterized protein protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
tae00460 Cyanoamino acid metabolism 2
tae00500 Starch and sucrose metabolism 2
tae00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03015 mRNA surveillance pathway 3
tae03018 RNA degradation 2
tae00460 Cyanoamino acid metabolism 2
tae00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00220 Arginine biosynthesis 2
cre00240 Pyrimidine metabolism 2
cre00250 Alanine, aspartate and glutamate metabolism 2
cre01240 Biosynthesis of cofactors 2
cre00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 2
nta03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818051 100305959 100806490 101267437 4345779 103865361 103867412 100241679 7483265 11423900 123043356 123051210 123424551 107914283 107913392 106447213 125600628 5727572 8083511 102581658 102618023 100825738 107770914 107824783
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