ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100306620	uncharacterized LOC100306620
gma-r.7	100306620	uncharacterized LOC100306620
gma-m.5	100306620	uncharacterized LOC100306620
gma-u.5	100499771	uncharacterized LOC100499771
mtr-u.5	11436781	peroxiredoxin-2B
ppo-u.5	112325676	peroxiredoxin-2-like
ppo-u.5	7476296	peroxiredoxin-2-like
ath-u.5	AT1G60740	Thioredoxin superfamily protein
ath-u.5	TPX2	thioredoxin-dependent peroxidase 2
ath-u.5	TPX1	thioredoxin-dependent peroxidase 1
vvi-u.5	100243939	type II peroxiredoxin C
sly-u.5	TPx1	thioredoxin peroxidase 1
osa-u.5	4325511	peroxiredoxin-2C-like
zma-u.5	100283392	uncharacterized LOC100283392

functional annotation

KEGG

GO BP

GO:0045454 [list] [network] cell redox homeostasis	(39 genes)	IEA
GO:0034599 [list] [network] cellular response to oxidative stress	(54 genes)	IEA
GO:0042744 [list] [network] hydrogen peroxide catabolic process	(194 genes)	IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(9233 genes)

IEA

GO MF

GO:0008379 [list] [network] thioredoxin peroxidase activity

(13 genes)

IEA

Protein

NP_001237663.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 8, vacu 1

(predict for NP_001237663.1)

Subcellular
localization
TargetP

other 7

(predict for NP_001237663.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100306620	gma-r.7 for 100306620	gma-m.5 for 100306620	gma-u.5 for 100499771	mtr-u.5 for 11436781	ppo-u.5 for 112325676	ppo-u.5 for 7476296	ath-u.5 for AT1G60740	ath-u.5 for TPX2	ath-u.5 for TPX1	vvi-u.5 for 100243939	sly-u.5 for TPx1	osa-u.5 for 4325511	zma-u.5 for 100283392

Ortholog ID: 7082

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

TPX2

TPx1

Function^*

uncharacterized LOC100499771

uncharacterized LOC100306620

peroxiredoxin-2B

peroxiredoxin-2-like

Thioredoxin superfamily protein

thioredoxin-dependent peroxidase 2

peroxiredoxin-2B

type II peroxiredoxin C

peroxiredoxin-2

peroxiredoxin-2B

peroxiredoxin-2

peroxiredoxin-2-like

thioredoxin peroxidase 1

peroxiredoxin-2B-like

peroxiredoxin-2B

peroxiredoxin-2C-like

uncharacterized LOC100283392

peroxiredoxin-2C

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	6
ppo04120	Ubiquitin mediated proteolysis	4
ppo04141	Protein processing in endoplasmic reticulum	3
ppo03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	5
ppo00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00480	Glutathione metabolism	2
ath01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00053	Ascorbate and aldarate metabolism	2
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01230	Biosynthesis of amino acids	4
bra00220	Arginine biosynthesis	3
bra01210	2-Oxocarboxylic acid metabolism	3
bra01200	Carbon metabolism	3
bra00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00966	Glucosinolate biosynthesis	9
bra01210	2-Oxocarboxylic acid metabolism	9
bra00290	Valine, leucine and isoleucine biosynthesis	3
bra00270	Cysteine and methionine metabolism	2
bra00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	2
vvi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00710	Carbon fixation by Calvin cycle	12
ghi01200	Carbon metabolism	12
ghi00010	Glycolysis / Gluconeogenesis	10
ghi01230	Biosynthesis of amino acids	9
ghi00020	Citrate cycle (TCA cycle)	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00710	Carbon fixation by Calvin cycle	12
ghi01200	Carbon metabolism	12
ghi00010	Glycolysis / Gluconeogenesis	10
ghi01230	Biosynthesis of amino acids	9
ghi00020	Citrate cycle (TCA cycle)	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00966	Glucosinolate biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	5
cit03083	Polycomb repressive complex	2
cit04120	Ubiquitin mediated proteolysis	2
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3
cit04120	Ubiquitin mediated proteolysis	2
cit03420	Nucleotide excision repair	2
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	5
sot04145	Phagosome	4
sot01200	Carbon metabolism	3
sot04142	Lysosome	3
sot04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	2
nta00480	Glutathione metabolism	2
nta00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	2
nta00480	Glutathione metabolism	2
nta00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	7
zma01200	Carbon metabolism	5
zma04146	Peroxisome	4
zma00020	Citrate cycle (TCA cycle)	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	4
tae00710	Carbon fixation by Calvin cycle	4
tae01200	Carbon metabolism	4
tae01230	Biosynthesis of amino acids	4
tae00051	Fructose and mannose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	5
tae00710	Carbon fixation by Calvin cycle	5
tae01200	Carbon metabolism	5
tae01230	Biosynthesis of amino acids	5
tae00051	Fructose and mannose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	4
hvu03050	Proteasome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	8

Expression

Expression pattern

Entrez Gene ID^*

100499771

100306620

11436781

112325676

7476296

842368

842909

103852305

103831078

100243939

107939497

107932890

111199500

106422120

102626097

127902552

606303

102606254

107830577

107763907

4325511

100283392

123078997

123070589

123444094

8061850

100834317

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100306620 (gma-u.5 coexpression data)

Top 50 enrichment test to 100306620 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	1	2	3	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100306620 (gma-u.5 coexpression data)

Top 50 enrichment test to 100306620 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**