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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100381699   DNA damage-binding protein 2 
 zma-r.6   100381699   DNA damage-binding protein 2 
 sbi-r.1   8060824   DNA damage-binding protein 2 
 osa-u.5   4325482   DNA damage-binding protein 2-like 
 tae-r.2   123068492   DNA damage-binding protein 2 
 tae-r.2   123060019   DNA damage-binding protein 2 
 tae-r.2   123076991   DNA damage-binding protein 2 
 hvu-r.1   123442607   DNA damage-binding protein 2 
 bdi-r.1   100842647   DNA damage-binding protein 2 
 ath-u.5   DDB2   damaged DNA binding 2 
 gma-u.5   100793506   protein DAMAGED DNA-BINDING 2 
 gma-u.5   100527914   protein DAMAGED DNA-BINDING 2 
 sly-u.5   101265575   protein DAMAGED DNA-BINDING 2 
 vvi-u.5   100250121   protein DAMAGED DNA-BINDING 2 
 ppo-u.5   7478534   protein DAMAGED DNA-BINDING 2 
 mtr-u.5   11405495   protein DAMAGED DNA-BINDING 2 
 ghi-r.1   107936460   protein DAMAGED DNA-BINDING 2 
 ghi-r.1   121212677   protein DAMAGED DNA-BINDING 2 
 bna-r.1   106387387   protein DAMAGED DNA-BINDING 2 
 bna-r.1   106388037   protein DAMAGED DNA-BINDING 2 
 sot-r.1   102582170   protein DAMAGED DNA-BINDING 2 
 cit-r.1   102616830   protein DAMAGED DNA-BINDING 2 
 nta-r.1   107760564   protein DAMAGED DNA-BINDING 2-like 
 nta-r.1   107759199   protein DAMAGED DNA-BINDING 2 
 cre-r.1   CHLRE_13g577550v5   uncharacterized protein 

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Top 50 coexpressed genes to 100381699 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100381699 (zma-u.5 coexpression data)

CoexMap"100381699"


zmaLOC100381699 | Entrez gene ID : 100381699      
Species zma sbi osa tae hvu bdi ath gma sly vvi ppo mtr ghi bna sot cit nta cre bra
Paralog 2 1 1 3 1 1 1 2 1 1 1 1 2 2 1 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03420 [list] [network] Nucleotide excision repair (94 genes)
zma04120 [list] [network] Ubiquitin mediated proteolysis (176 genes)
GO BP
GO:0009411 [list] [network] response to UV  (14 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (335 genes)  IEA  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (24 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0003684 [list] [network] damaged DNA binding  (40 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein XP_008655626.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  nucl 2,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_008655626.1)
Subcellular
localization
TargetP
mito 6,  other 5  (predict for XP_008655626.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100381699
zma-r.6
for
100381699
sbi-r.1
for
8060824
osa-u.5
for
4325482
tae-r.2
for
123068492
tae-r.2
for
123060019
tae-r.2
for
123076991
hvu-r.1
for
123442607
bdi-r.1
for
100842647
ath-u.5
for
DDB2
gma-u.5
for
100793506
gma-u.5
for
100527914
sly-u.5
for
101265575
vvi-u.5
for
100250121
ppo-u.5
for
7478534
mtr-u.5
for
11405495
ghi-r.1
for
107936460
ghi-r.1
for
121212677
bna-r.1
for
106387387
bna-r.1
for
106388037
sot-r.1
for
102582170
cit-r.1
for
102616830
nta-r.1
for
107760564
nta-r.1
for
107759199
cre-r.1
for
CHLRE_13g577550v5


Ortholog ID: 10409
Species zma sbi osa tae tae tae hvu bdi ath gma gma sly vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100381699 LOC8060824 LOC4325482 LOC123068492 LOC123060019 LOC123076991 LOC123442607 LOC100842647 DDB2 LOC100793506 LOC100527914 LOC101265575 LOC100250121 LOC7478534 LOC11405495 LOC107936460 LOC121212677 LOC106387387 LOC106388037 LOC102582170 LOC102616830 LOC107760564 LOC107759199 CHLRE_13g577550v5
Function* DNA damage-binding protein 2 DNA damage-binding protein 2 DNA damage-binding protein 2-like DNA damage-binding protein 2 DNA damage-binding protein 2 DNA damage-binding protein 2 DNA damage-binding protein 2 DNA damage-binding protein 2 damaged DNA binding 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2 protein DAMAGED DNA-BINDING 2-like protein DAMAGED DNA-BINDING 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03083 Polycomb repressive complex 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 4
tae03420 Nucleotide excision repair 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
tae03420 Nucleotide excision repair 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00650 Butanoate metabolism 2
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
hvu03015 mRNA surveillance pathway 2
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00941 Flavonoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00750 Vitamin B6 metabolism 2
gma01240 Biosynthesis of cofactors 2
gma03420 Nucleotide excision repair 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03420 Nucleotide excision repair 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 4
ghi03420 Nucleotide excision repair 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 4
ghi03420 Nucleotide excision repair 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 4
bna03420 Nucleotide excision repair 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 4
bna03420 Nucleotide excision repair 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00941 Flavonoid biosynthesis 3
sot03018 RNA degradation 2
sot00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
nta00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100381699 8060824 4325482 123068492 123060019 123076991 123442607 100842647 835990 100793506 100527914 101265575 100250121 7478534 11405495 107936460 121212677 106387387 106388037 102582170 102616830 107760564 107759199 5719263
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