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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100383273   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 zma-r.6   100383273   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 zma-m.5   100383273   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 sbi-r.1   8054808   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 osa-u.5   4347560   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 tae-r.2   123122160   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 tae-r.2   123112666   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 tae-r.2   123104384   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 hvu-r.1   123399871   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 bdi-r.1   100823301   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 ath-u.5   AT2G43370   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100814109   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 gma-u.5   100807978   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 sly-u.5   101256810   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 bra-r.6   103858068   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 vvi-u.5   100261074   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 ppo-u.5   18106951   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 mtr-u.5   11442373   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 ghi-r.1   107933655   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 ghi-r.1   107890921   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 bna-r.1   111215096   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 bna-r.1   106388322   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 sot-r.1   102599679   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 cit-r.1   102630036   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 nta-r.1   107811410   U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like 
 nta-r.1   107807733   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 

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Top 50 coexpressed genes to 100383273 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100383273 (zma-u.5 coexpression data)

CoexMap"100383273"


zmaLOC100383273 | Entrez gene ID : 100383273      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 3 1 1 1 2 1 1 1 1 1 2 2 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (175 genes)  IEA  
GO CC
GO:0071011 [list] [network] precatalytic spliceosome  (23 genes)  IEA  
GO MF
GO:0017069 [list] [network] snRNA binding  (15 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (346 genes)  IEA  
Protein NP_001169404.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_001169404.1)
Subcellular
localization
TargetP
other 7,  scret 4  (predict for NP_001169404.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100383273
zma-r.6
for
100383273
zma-m.5
for
100383273
sbi-r.1
for
8054808
osa-u.5
for
4347560
tae-r.2
for
123122160
tae-r.2
for
123112666
tae-r.2
for
123104384
hvu-r.1
for
123399871
bdi-r.1
for
100823301
ath-u.5
for
AT2G43370
gma-u.5
for
100814109
gma-u.5
for
100807978
sly-u.5
for
101256810
bra-r.6
for
103858068
vvi-u.5
for
100261074
ppo-u.5
for
18106951
mtr-u.5
for
11442373
ghi-r.1
for
107933655
ghi-r.1
for
107890921
bna-r.1
for
111215096
bna-r.1
for
106388322
sot-r.1
for
102599679
cit-r.1
for
102630036
nta-r.1
for
107811410
nta-r.1
for
107807733


Ortholog ID: 9436
Species zma sbi osa tae tae tae hvu bdi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC100383273 LOC8054808 LOC4347560 LOC123122160 LOC123112666 LOC123104384 LOC123399871 LOC100823301 AT2G43370 LOC100814109 LOC100807978 LOC101256810 LOC103858068 LOC100261074 LOC18106951 LOC11442373 LOC107933655 LOC107890921 LOC106388322 LOC106446721 LOC102599679 LOC102630036 LOC107811410 LOC107807733
Function* U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein RNA-binding (RRM/RBD/RNP motifs) family protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like U11/U12 small nuclear ribonucleoprotein 35 kDa protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa03015 mRNA surveillance pathway 2
osa04144 Endocytosis 2
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae04016 MAPK signaling pathway - plant 2
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 4
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100383273 8054808 4347560 123122160 123112666 123104384 123399871 100823301 818938 100814109 100807978 101256810 103858068 100261074 18106951 11442373 107933655 107890921 106388322 106446721 102599679 102630036 107811410 107807733
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