ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100383331	uncharacterized LOC100383331
zma-r.6	100383331	uncharacterized LOC100383331
zma-u.5	103625824	transcription factor PCF6
zma-u.5	109940870	transcription factor PCF6
zma-u.5	100281398	uncharacterized LOC100281398
osa-u.5	4342416	transcription factor PCF6
osa-u.5	4334346	transcription factor PCF6-like
ath-u.5	TCP2	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2
ath-u.5	TCP24	TEOSINTE BRANCHED 1, cycloidea, and PCF family 24
gma-u.5	100806032	transcription factor TCP2
gma-u.5	100816799	transcription factor TCP2
gma-u.5	100802134	transcription factor TCP2
sly-u.5	101246741	transcription factor TCP2-like
sly-u.5	TCP24	TCP transcription factor 24
vvi-u.5	100249845	transcription factor TCP2
ppo-u.5	7497052	transcription factor TCP2
ppo-u.5	7470181	transcription factor TCP2
mtr-u.5	120577367	transcription factor TCP2

Annotation

functional annotation

KEGG

GO BP

GO:2000032 [list] [network] regulation of secondary shoot formation

(10 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(3371 genes)

IEA

GO MF

GO:0043565 [list] [network] sequence-specific DNA binding	(823 genes)	IEA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1355 genes)	IEA

Protein

NP_001336965.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for NP_001336965.1)

Subcellular
localization
TargetP

other 7, mito 3

(predict for NP_001336965.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100383331	zma-r.6 for 100383331	zma-u.5 for 103625824	zma-u.5 for 109940870	zma-u.5 for 100281398	osa-u.5 for 4342416	osa-u.5 for 4334346	ath-u.5 for TCP2	ath-u.5 for TCP24	gma-u.5 for 100806032	gma-u.5 for 100816799	gma-u.5 for 100802134	sly-u.5 for 101246741	sly-u.5 for TCP24	vvi-u.5 for 100249845	ppo-u.5 for 7497052	ppo-u.5 for 7470181	mtr-u.5 for 120577367

Ortholog

Ortholog ID: 3247

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

TCP2

TCP24

TCP24

Function^*

uncharacterized LOC100281398

transcription factor PCF6

transcription factor PCF6-like

transcription factor PCF6

transcription factor PCF6-like

transcription factor PCF6

TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2

TEOSINTE BRANCHED 1, cycloidea, and PCF family 24

transcription factor TCP2

TCP transcription factor 24

transcription factor TCP2-like

transcription factor TCP24

transcription factor TCP2

transcription factor TCP24-like

transcription factor TCP2-like

transcription factor TCP2

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2
hvu05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00561	Glycerolipid metabolism	2
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00561	Glycerolipid metabolism	2
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00562	Inositol phosphate metabolism	2
ppo04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00100	Steroid biosynthesis	2
ppo03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00561	Glycerolipid metabolism	2
cit00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03083	Polycomb repressive complex	2
nta04120	Ubiquitin mediated proteolysis	2
nta04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

100281398

103625824

8086415

8083919

4334346

4342416

123188740

123105313

123452576

100834650

100827523

827568

839901

100787772

100802134

100736524

101246741

103835232

103840425

100249845

7497052

7470181

120577367

107913803

107959965

106383147

106424390

102582424

102617811

107789416

107799751

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100383331 (zma-u.5 coexpression data)

Top 50 enrichment test to 100383331 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	2	2	3	2	1	2	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100383331 (zma-u.5 coexpression data)

Top 50 enrichment test to 100383331 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**