ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100384430	Thioredoxin family protein
zma-r.6	100384430	Thioredoxin family protein
zma-u.5	103643193	uncharacterized LOC103643193
zma-u.5	103643192	Thioredoxin family protein
zma-u.5	100272476	uncharacterized LOC100272476
osa-u.5	4346305	uncharacterized LOC4346305
ath-u.5	AT5G03880	Thioredoxin family protein
gma-u.5	100792004	uncharacterized LOC100792004
gma-u.5	100789895	uncharacterized LOC100789895
sly-u.5	101255233	uncharacterized LOC101255233
vvi-u.5	100261348	uncharacterized LOC100261348
ppo-u.5	7492255	uncharacterized LOC7492255
mtr-u.5	25483820	uncharacterized LOC25483820

functional annotation

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(803 genes)

IEA

GO MF

Protein

NP_001309033.1 [sequence] [blastp]
XP_035822964.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, mito 1	(predict for NP_001309033.1)
chlo 9, mito 1	(predict for XP_035822964.1)

Subcellular
localization
TargetP

chlo 5, mito 5	(predict for NP_001309033.1)
mito 5, chlo 4	(predict for XP_035822964.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100384430	zma-r.6 for 100384430	zma-u.5 for 103643193	zma-u.5 for 103643192	zma-u.5 for 100272476	osa-u.5 for 4346305	ath-u.5 for AT5G03880	gma-u.5 for 100792004	gma-u.5 for 100789895	sly-u.5 for 101255233	vvi-u.5 for 100261348	ppo-u.5 for 7492255	mtr-u.5 for 25483820

Ortholog ID: 5577

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

Thioredoxin family protein

uncharacterized LOC103643193

uncharacterized LOC8057981

uncharacterized LOC4346305

uncharacterized LOC123168769

uncharacterized LOC123163668

uncharacterized LOC123410951

uncharacterized LOC123407844

uncharacterized LOC100825225

Thioredoxin family protein

uncharacterized LOC100789895

uncharacterized LOC100792004

uncharacterized LOC101255233

uncharacterized LOC103847353

uncharacterized LOC103855546

uncharacterized LOC100261348

uncharacterized LOC7492255

uncharacterized LOC25483820

uncharacterized LOC107925506

uncharacterized LOC107928127

uncharacterized BNAA10G26270D

uncharacterized BNACNNG10640D

uncharacterized LOC102603338

uncharacterized LOC102621296

uncharacterized LOC142164574

uncharacterized LOC142164576

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00230	Purine metabolism	2
ath00730	Thiamine metabolism	2
ath01232	Nucleotide metabolism	2
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	5
gma00270	Cysteine and methionine metabolism	2
gma00920	Sulfur metabolism	2
gma01200	Carbon metabolism	2
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	7
bra00010	Glycolysis / Gluconeogenesis	6
bra00710	Carbon fixation by Calvin cycle	6
bra01230	Biosynthesis of amino acids	6
bra00030	Pentose phosphate pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	2
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	8
ppo00710	Carbon fixation by Calvin cycle	6
ppo01230	Biosynthesis of amino acids	5
ppo00195	Photosynthesis	4
ppo00030	Pentose phosphate pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04146	Peroxisome	2
ghi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03060	Protein export	2
cit00906	Carotenoid biosynthesis	2
cit00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	3
nta00260	Glycine, serine and threonine metabolism	2
nta00460	Cyanoamino acid metabolism	2
nta00630	Glyoxylate and dicarboxylate metabolism	2
nta00670	One carbon pool by folate	2

Expression

Expression pattern

Entrez Gene ID^*

103643192

103643193

8057981

4346305

123168769

123163668

123410951

123407844

100825225

831679

100789895

100792004

101255233

103847353

103855546

100261348

7492255

25483820

107925506

107928127

106372656

106433859

102603338

102621296

142164574

142164576

5722028

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100384430 (zma-u.5 coexpression data)

Top 50 enrichment test to 100384430 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	1	1	2	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100384430 (zma-u.5 coexpression data)

Top 50 enrichment test to 100384430 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**