ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100500268	uncharacterized LOC100500268
gma-r.7	100500268	uncharacterized LOC100500268
gma-u.5	100305922	uncharacterized LOC100305922
gma-u.5	100793579	SUMO-conjugating enzyme SCE1
gma-u.5	100803022	SUMO-conjugating enzyme SCE1
mtr-u.5	11410591	SUMO-conjugating enzyme SCE1
mtr-u.5	25493475	SUMO-conjugating enzyme SCE1
ppo-u.5	18104855	SUMO-conjugating enzyme SCE1
ppo-u.5	18104857	SUMO-conjugating enzyme SCE1
ppo-u.5	7476396	SUMO-conjugating enzyme SCE1
ath-u.5	SCE1	sumo conjugation enzyme 1
bra-r.6	103862793	SUMO-conjugating enzyme SCE1
bra-r.6	103830122	SUMO-conjugating enzyme SCE1
vvi-u.5	100262698	SUMO-conjugating enzyme SCE1
vvi-u.5	100242395	SUMO-conjugating enzyme SCE1
ghi-r.1	107905593	SUMO-conjugating enzyme SCE1
ghi-r.1	107913225	SUMO-conjugating enzyme SCE1
ghi-r.1	107913372	SUMO-conjugating enzyme SCE1
bna-r.1	106444983	SUMO-conjugating enzyme SCE1
bna-r.1	106432128	SUMO-conjugating enzyme SCE1
bna-r.1	106396773	SUMO-conjugating enzyme SCE1
cit-r.1	102625998	SUMO-conjugating enzyme SCE1-like
cit-r.1	102623921	SUMO-conjugating enzyme SCE1
sly-u.5	101244048	SUMO-conjugating enzyme SCE1
sly-u.5	101247296	SUMO-conjugating enzyme SCE1
sly-u.5	101248192	SUMO-conjugating enzyme SCE1
sot-r.1	102595511	SUMO-conjugating enzyme SCE1-like
sot-r.1	102581266	SUMO-conjugating enzyme SCE1-like
sot-r.1	102582827	SUMO-conjugating enzyme SCE1-like
nta-r.1	107812236	SUMO-conjugating enzyme SCE1
nta-r.1	107798054	SUMO-conjugating enzyme SCE1-like
nta-r.1	107761981	SUMO-conjugating enzyme SCE1
osa-u.5	4349236	SUMO-conjugating enzyme SCE1
osa-u.5	4336760	SUMO-conjugating enzyme SCE1
osa-u.5	4331446	SUMO-conjugating enzyme SCE1
zma-u.5	103637558	SUMO-conjugating enzyme SCE1
zma-u.5	103639085	SUMO-conjugating enzyme SCE1
zma-u.5	103646037	SUMO-conjugating enzyme SCE1
tae-r.2	123126944	SUMO-conjugating enzyme SCE1
tae-r.2	123051040	SUMO-conjugating enzyme SCE1
hvu-r.1	123449877	SUMO-conjugating enzyme SCE1-like
hvu-r.1	123437278	SUMO-conjugating enzyme SCE1
sbi-r.1	8085719	SUMO-conjugating enzyme SCE1
sbi-r.1	8061341	SUMO-conjugating enzyme SCE1
bdi-r.1	100823283	SUMO-conjugating enzyme SCE1
bdi-r.1	100840862	SUMO-conjugating enzyme SCE1
cre-r.1	CHLRE_02g142000v5	uncharacterized protein

Top 50 coexpressed genes to 100500268 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100500268 (gma-u.5 coexpression data)

CoexMap"100500268"

[Cytoscape]

Annotation

functional annotation

KEGG

gmx03013 [list] [network] Nucleocytoplasmic transport (189 genes)

gmx04120 [list] [network] Ubiquitin mediated proteolysis (237 genes)

GO BP

GO:0016925 [list] [network] protein sumoylation

(17 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(5531 genes)

IEA

GO MF

GO:0061656 [list] [network] SUMO conjugating enzyme activity

(4 genes)

IEA

Protein

NP_001235590.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, plas 1, cyto 1, mito 1, golg_plas 1, cysk_plas 1, E.R._plas 1

(predict for NP_001235590.1)

Subcellular
localization
TargetP

other 7, mito 6

(predict for NP_001235590.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100500268	gma-r.7 for 100500268	gma-u.5 for 100305922	gma-u.5 for 100793579	gma-u.5 for 100803022	mtr-u.5 for 11410591	mtr-u.5 for 25493475	ppo-u.5 for 18104855	ppo-u.5 for 18104857	ppo-u.5 for 7476396	ath-u.5 for SCE1	bra-r.6 for 103862793	bra-r.6 for 103830122	vvi-u.5 for 100262698	vvi-u.5 for 100242395	ghi-r.1 for 107905593	ghi-r.1 for 107913225	ghi-r.1 for 107913372	bna-r.1 for 106444983	bna-r.1 for 106432128	bna-r.1 for 106396773	cit-r.1 for 102625998	cit-r.1 for 102623921	sly-u.5 for 101244048	sly-u.5 for 101247296	sly-u.5 for 101248192	sot-r.1 for 102595511	sot-r.1 for 102581266	sot-r.1 for 102582827	nta-r.1 for 107812236	nta-r.1 for 107798054	nta-r.1 for 107761981	osa-u.5 for 4349236	osa-u.5 for 4336760	osa-u.5 for 4331446	zma-u.5 for 103637558	zma-u.5 for 103639085	zma-u.5 for 103646037	tae-r.2 for 123126944	tae-r.2 for 123051040	hvu-r.1 for 123449877	hvu-r.1 for 123437278	sbi-r.1 for 8085719	sbi-r.1 for 8061341	bdi-r.1 for 100823283	bdi-r.1 for 100840862	cre-r.1 for CHLRE_02g142000v5

Ortholog

Ortholog ID: 1547

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

SCE1

Function^*

uncharacterized LOC100500268

uncharacterized LOC100305922

SUMO-conjugating enzyme SCE1

sumo conjugation enzyme 1

SUMO-conjugating enzyme SCE1

SUMO-conjugating enzyme SCE1-like

SUMO-conjugating enzyme SCE1

SUMO-conjugating enzyme SCE1-like

SUMO-conjugating enzyme SCE1

SUMO-conjugating enzyme SCE1-like

SUMO-conjugating enzyme SCE1

SUMO-conjugating enzyme SCE1-like

SUMO-conjugating enzyme SCE1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03050	Proteasome	4
gma04142	Lysosome	2
gma03013	Nucleocytoplasmic transport	2
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	3
gma04120	Ubiquitin mediated proteolysis	3
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2
gma03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	4
gma04120	Ubiquitin mediated proteolysis	4
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	7
mtr04145	Phagosome	4
mtr03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4
mtr04141	Protein processing in endoplasmic reticulum	3
mtr04144	Endocytosis	3
mtr03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	3
ppo03013	Nucleocytoplasmic transport	3
ppo04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	4
ppo04120	Ubiquitin mediated proteolysis	4
ppo03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	4
ppo04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	2
ath03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	6
bra04145	Phagosome	3
bra04016	MAPK signaling pathway - plant	2
bra04070	Phosphatidylinositol signaling system	2
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	4
bra04145	Phagosome	3
bra04141	Protein processing in endoplasmic reticulum	3
bra03013	Nucleocytoplasmic transport	2
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00230	Purine metabolism	2
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	2
ghi04120	Ubiquitin mediated proteolysis	2
ghi00514	Other types of O-glycan biosynthesis	2
ghi00100	Steroid biosynthesis	2
ghi00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	4
ghi03082	ATP-dependent chromatin remodeling	3
ghi03013	Nucleocytoplasmic transport	2
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	5
bna03040	Spliceosome	5
bna03013	Nucleocytoplasmic transport	2
bna04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	6
bna04120	Ubiquitin mediated proteolysis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	6
bna04120	Ubiquitin mediated proteolysis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	6
cit03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03020	RNA polymerase	2
sly03420	Nucleotide excision repair	2
sly03018	RNA degradation	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	4
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	4
sot04142	Lysosome	3
sot04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	7
sot04145	Phagosome	4
sot04142	Lysosome	3
sot03013	Nucleocytoplasmic transport	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	5
sot03013	Nucleocytoplasmic transport	2
sot04120	Ubiquitin mediated proteolysis	2
sot04142	Lysosome	2
sot04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4
nta03013	Nucleocytoplasmic transport	3
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	7
nta00190	Oxidative phosphorylation	2
nta03013	Nucleocytoplasmic transport	2
nta04120	Ubiquitin mediated proteolysis	2
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	2
nta00053	Ascorbate and aldarate metabolism	2
nta00071	Fatty acid degradation	2
nta00280	Valine, leucine and isoleucine degradation	2
nta00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03013	Nucleocytoplasmic transport	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	6
osa04145	Phagosome	6
osa04142	Lysosome	3
osa03013	Nucleocytoplasmic transport	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	7
zma03040	Spliceosome	3
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	6
zma04141	Protein processing in endoplasmic reticulum	2
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	4
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	4
tae03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	7
tae04120	Ubiquitin mediated proteolysis	7
tae03008	Ribosome biogenesis in eukaryotes	4
tae03250	Viral life cycle - HIV-1	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	4
tae04120	Ubiquitin mediated proteolysis	4
tae01240	Biosynthesis of cofactors	3
tae00750	Vitamin B6 metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	2
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	3
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	6
bdi03040	Spliceosome	4
bdi04141	Protein processing in endoplasmic reticulum	2
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	4
bdi03013	Nucleocytoplasmic transport	2
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03013	Nucleocytoplasmic transport	2

Expression

Expression pattern

Entrez Gene ID^*

100500268

100305922

100803022

11410591

25493475

18104855

18104857

7472685

824956

103862793

103830122

100262698

100242395

107905593

107913225

107932971

106396773

106390290

106353223

102625998

102623921

101244048

101247296

101260621

102581266

102582827

102596104

107764252

107780881

107810563

4349236

4336760

4331446

103637558

103639085

100283731

123051040

123093766

123099002

123449877

123437278

8057676

8060432

100823283

100840862

5720443

The preparation time of this page was 2.8 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	2	3	1	2	2	3	3	2	3	3	3	3	3	2	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100500268 (gma-u.5 coexpression data)

Top 50 enrichment test to 100500268 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**