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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100500478   nucleoside diphosphate kinase 2, chloroplastic 
 gma-r.7   100500478   nucleoside diphosphate kinase 2, chloroplastic 
 gma-m.5   100500478   nucleoside diphosphate kinase 2, chloroplastic 
 gma-u.5   100811753   nucleoside diphosphate kinase 2, chloroplastic-like 
 mtr-u.5   11407961   nucleoside diphosphate kinase 2, chloroplastic 
 ppo-u.5   7458369   nucleoside diphosphate kinase 2, chloroplastic 
 ath-u.5   NDPK2   nucleoside diphosphate kinase 2 
 bra-r.6   103837465   nucleoside diphosphate kinase II, chloroplastic-like 
 bra-r.6   103873747   nucleoside diphosphate kinase II, chloroplastic 
 vvi-u.5   100242823   nucleoside diphosphate kinase 2, chloroplastic 
 ghi-r.1   121221071   nucleoside diphosphate kinase 2, chloroplastic 
 ghi-r.1   107931375   nucleoside diphosphate kinase 2, chloroplastic 
 bna-r.1   106431260   nucleoside diphosphate kinase II, chloroplastic-like 
 bna-r.1   106415051   nucleoside diphosphate kinase II, chloroplastic-like 
 bna-r.1   106409161   nucleoside diphosphate kinase II, chloroplastic 
 cit-r.1   102623060   nucleoside diphosphate kinase 2, chloroplastic 
 sly-u.5   101244761   nucleoside diphosphate kinase 2, chloroplastic 
 sly-u.5   101262221   nucleoside diphosphate kinase 2, chloroplastic 
 sot-r.1   102604726   nucleoside diphosphate kinase 2, chloroplastic-like 
 sot-r.1   102594235   nucleoside diphosphate kinase 2, chloroplastic 
 nta-r.1   107825581   nucleoside diphosphate kinase 2, chloroplastic-like 
 nta-r.1   107768038   nucleoside diphosphate kinase 2, chloroplastic 
 nta-r.1   107829496   nucleoside diphosphate kinase 2, chloroplastic-like 
 osa-u.5   4352460   nucleoside diphosphate kinase 1 
 zma-u.5   100283790   nucleoside diphosphate kinase 2 
 tae-r.2   123119794   nucleoside diphosphate kinase 2, chloroplastic 
 tae-r.2   123115840   nucleoside diphosphate kinase 2, chloroplastic 
 tae-r.2   123102612   nucleoside diphosphate kinase 
 hvu-r.1   123400132   nucleoside diphosphate kinase 2, chloroplastic 
 sbi-r.1   8068811   nucleoside diphosphate kinase 2, chloroplastic 
 bdi-r.1   NDPK3   nucleoside diphosphate kinase 2, chloroplastic 
 cre-r.1   CHLRE_07g325734v5   uncharacterized protein 

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Top 50 coexpressed genes to 100500478 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100500478 (gma-u.5 coexpression data)

CoexMap"100500478"


gmaLOC100500478 | Entrez gene ID : 100500478      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 1 2 1 2 3 1 2 2 3 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00230 [list] [network] Purine metabolism (174 genes)
gmx00240 [list] [network] Pyrimidine metabolism (120 genes)
gmx01232 [list] [network] Nucleotide metabolism (148 genes)
gmx01240 [list] [network] Biosynthesis of cofactors (475 genes)
gmx04016 [list] [network] MAPK signaling pathway - plant (304 genes)
GO BP
GO:0006228 [list] [network] UTP biosynthetic process  (10 genes)  IEA  
GO:0006183 [list] [network] GTP biosynthetic process  (12 genes)  IEA  
GO:0006241 [list] [network] CTP biosynthetic process  (18 genes)  IEA  
GO CC
GO MF
GO:0004550 [list] [network] nucleoside diphosphate kinase activity  (14 genes)  IEA  
Protein XP_003525659.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 3  (predict for XP_003525659.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_003525659.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100500478
gma-r.7
for
100500478
gma-m.5
for
100500478
gma-u.5
for
100811753
mtr-u.5
for
11407961
ppo-u.5
for
7458369
ath-u.5
for
NDPK2
bra-r.6
for
103837465
bra-r.6
for
103873747
vvi-u.5
for
100242823
ghi-r.1
for
121221071
ghi-r.1
for
107931375
bna-r.1
for
106431260
bna-r.1
for
106415051
bna-r.1
for
106409161
cit-r.1
for
102623060
sly-u.5
for
101244761
sly-u.5
for
101262221
sot-r.1
for
102604726
sot-r.1
for
102594235
nta-r.1
for
107825581
nta-r.1
for
107768038
nta-r.1
for
107829496
osa-u.5
for
4352460
zma-u.5
for
100283790
tae-r.2
for
123119794
tae-r.2
for
123115840
tae-r.2
for
123102612
hvu-r.1
for
123400132
sbi-r.1
for
8068811
bdi-r.1
for
NDPK3
cre-r.1
for
CHLRE_07g325734v5


Ortholog ID: 6391
Species mtr ppo ath bra bra vvi ghi ghi bna bna bna cit sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC11407961 LOC7458369 NDPK2 LOC103837465 LOC103873747 LOC100242823 LOC121221071 LOC107931375 LOC106431260 LOC106415051 LOC106409161 LOC102623060 LOC101244761 LOC101262221 LOC102604726 LOC102594235 LOC107825581 LOC107768038 LOC107829496 LOC4352460 LOC100283790 LOC123119794 LOC123115840 LOC123102612 LOC123400132 LOC8068811 NDPK3 CHLRE_07g325734v5
Function* nucleoside diphosphate kinase 2, chloroplastic nucleoside diphosphate kinase 2, chloroplastic nucleoside diphosphate kinase 2 nucleoside diphosphate kinase II, chloroplastic-like nucleoside diphosphate kinase II, chloroplastic nucleoside diphosphate kinase 2, chloroplastic nucleoside diphosphate kinase 2, chloroplastic nucleoside diphosphate kinase 2, chloroplastic nucleoside diphosphate kinase II, chloroplastic-like nucleoside diphosphate kinase II, chloroplastic-like nucleoside diphosphate kinase II, chloroplastic nucleoside diphosphate kinase 2, chloroplastic nucleoside diphosphate kinase 2, chloroplastic nucleoside diphosphate kinase 2, chloroplastic nucleoside diphosphate kinase 2, chloroplastic-like nucleoside diphosphate kinase 2, chloroplastic nucleoside diphosphate kinase 2, chloroplastic-like nucleoside diphosphate kinase 2, chloroplastic nucleoside diphosphate kinase 2, chloroplastic-like nucleoside diphosphate kinase 1 nucleoside diphosphate kinase 2 nucleoside diphosphate kinase 2, chloroplastic nucleoside diphosphate kinase 2, chloroplastic nucleoside diphosphate kinase nucleoside diphosphate kinase 2, chloroplastic nucleoside diphosphate kinase 2, chloroplastic nucleoside diphosphate kinase 2, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 7
mtr00860 Porphyrin metabolism 6
mtr03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
ppo03010 Ribosome 3
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
ath04016 MAPK signaling pathway - plant 2
ath00240 Pyrimidine metabolism 2
ath01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 7
vvi00860 Porphyrin metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 4
ghi03010 Ribosome 4
ghi00053 Ascorbate and aldarate metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 4
ghi03010 Ribosome 4
ghi00053 Ascorbate and aldarate metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 7
bna01232 Nucleotide metabolism 7
bna00230 Purine metabolism 4
bna01240 Biosynthesis of cofactors 4
bna04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 7
bna01232 Nucleotide metabolism 7
bna01240 Biosynthesis of cofactors 5
bna00230 Purine metabolism 4
bna04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 7
bna01232 Nucleotide metabolism 7
bna01240 Biosynthesis of cofactors 7
bna00230 Purine metabolism 4
bna04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 8
sly00860 Porphyrin metabolism 5
sly03010 Ribosome 3
sly00230 Purine metabolism 2
sly00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly01240 Biosynthesis of cofactors 3
sly01230 Biosynthesis of amino acids 2
sly00230 Purine metabolism 2
sly00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 5
sot00860 Porphyrin metabolism 3
sot01230 Biosynthesis of amino acids 2
sot00061 Fatty acid biosynthesis 2
sot01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00785 Lipoic acid metabolism 7
nta01210 2-Oxocarboxylic acid metabolism 6
nta01240 Biosynthesis of cofactors 6
nta00010 Glycolysis / Gluconeogenesis 5
nta00020 Citrate cycle (TCA cycle) 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 4
nta03010 Ribosome 3
nta00220 Arginine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00190 Oxidative phosphorylation 4
nta00220 Arginine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
osa00860 Porphyrin metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma03040 Spliceosome 2
zma04144 Endocytosis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00460 Cyanoamino acid metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
tae00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 3
hvu01240 Biosynthesis of cofactors 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 4
sbi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi00190 Oxidative phosphorylation 2
sbi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
bdi01240 Biosynthesis of cofactors 4
bdi00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 5
cre00230 Purine metabolism 2
cre00240 Pyrimidine metabolism 2
cre01232 Nucleotide metabolism 2
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11407961 7458369 836451 103837465 103873747 100242823 121221071 107931375 106431260 106415051 106409161 102623060 101244761 101262221 102604726 102594235 107825581 107768038 107829496 4352460 100283790 123119794 123115840 123102612 123400132 8068811 104584378 5728424
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