ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100500492	uncharacterized LOC100500492
gma-r.7	100500492	uncharacterized LOC100500492
gma-m.5	100500492	uncharacterized LOC100500492
gma-u.5	100799935	thioredoxin O1, mitochondrial
mtr-u.5	25493422	thioredoxin O1, mitochondrial
ppo-u.5	18094635	thioredoxin O2, mitochondrial
ath-u.5	TO1	thioredoxin O1
ath-u.5	TO2	thioredoxin O2
bra-r.6	103865369	thioredoxin O1, mitochondrial
bra-r.6	103840275	thioredoxin O2, mitochondrial
vvi-u.5	100261132	thioredoxin O2, mitochondrial
ghi-r.1	121219871	thioredoxin O1, mitochondrial
ghi-r.1	107909829	thioredoxin O1, mitochondrial
bna-r.1	106366701	thioredoxin O2, mitochondrial-like
bna-r.1	106352370	thioredoxin O2, mitochondrial
bna-r.1	106447209	thioredoxin O1, mitochondrial
cit-r.1	102623497	thioredoxin O2, mitochondrial
sly-u.5	101262775	thioredoxin O2, mitochondrial
sot-r.1	102597067	thioredoxin O2, mitochondrial-like
nta-r.1	107815709	thioredoxin O2, mitochondrial
nta-r.1	107823704	thioredoxin O2, mitochondrial-like
osa-u.5	9266617	thioredoxin O, mitochondrial
zma-u.5	100283185	uncharacterized LOC100283185
tae-r.2	123168634	thioredoxin O, mitochondrial
tae-r.2	123159253	thioredoxin O, mitochondrial
hvu-r.1	123412095	thioredoxin O, mitochondrial-like
sbi-r.1	8083172	thioredoxin O, mitochondrial
bdi-r.1	100823442	thioredoxin O, mitochondrial

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001235135.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 7, chlo 3

(predict for NP_001235135.1)

Subcellular
localization
TargetP

mito 8, chlo 3

(predict for NP_001235135.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100500492	gma-r.7 for 100500492	gma-m.5 for 100500492	gma-u.5 for 100799935	mtr-u.5 for 25493422	ppo-u.5 for 18094635	ath-u.5 for TO1	ath-u.5 for TO2	bra-r.6 for 103865369	bra-r.6 for 103840275	vvi-u.5 for 100261132	ghi-r.1 for 121219871	ghi-r.1 for 107909829	bna-r.1 for 106366701	bna-r.1 for 106352370	bna-r.1 for 106447209	cit-r.1 for 102623497	sly-u.5 for 101262775	sot-r.1 for 102597067	nta-r.1 for 107815709	nta-r.1 for 107823704	osa-u.5 for 9266617	zma-u.5 for 100283185	tae-r.2 for 123168634	tae-r.2 for 123159253	hvu-r.1 for 123412095	sbi-r.1 for 8083172	bdi-r.1 for 100823442

Ortholog

Ortholog ID: 7943

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

TO1

TO2

Function^*

uncharacterized LOC100500492

thioredoxin O1, mitochondrial

thioredoxin O2, mitochondrial

thioredoxin O1

thioredoxin O2

thioredoxin O1, mitochondrial

thioredoxin O2, mitochondrial

thioredoxin O1, mitochondrial

thioredoxin O2, mitochondrial-like

thioredoxin O1, mitochondrial

thioredoxin O2, mitochondrial

thioredoxin O2, mitochondrial-like

thioredoxin O2, mitochondrial

thioredoxin O2, mitochondrial-like

thioredoxin O, mitochondrial

uncharacterized LOC100283185

thioredoxin O, mitochondrial

thioredoxin O, mitochondrial-like

thioredoxin O, mitochondrial

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00590	Arachidonic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00860	Porphyrin metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	3
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	2
ppo01240	Biosynthesis of cofactors	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	7
ath03018	RNA degradation	3
ath03020	RNA polymerase	3
ath03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	5
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	2
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	3
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	8
bna03020	RNA polymerase	4
bna03420	Nucleotide excision repair	4
bna03050	Proteasome	3
bna03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	9
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01230	Biosynthesis of amino acids	5
sly00190	Oxidative phosphorylation	4
sly00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
sly00340	Histidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	3
sot03008	Ribosome biogenesis in eukaryotes	2
sot04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00240	Pyrimidine metabolism	2
nta01240	Biosynthesis of cofactors	2
nta03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2
nta03020	RNA polymerase	2
nta03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	4
zma04120	Ubiquitin mediated proteolysis	3
zma00564	Glycerophospholipid metabolism	2
zma03420	Nucleotide excision repair	2
zma03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	4
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	4
tae03420	Nucleotide excision repair	4
tae03040	Spliceosome	4
tae03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	2
hvu03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3
bdi03420	Nucleotide excision repair	2
bdi04120	Ubiquitin mediated proteolysis	2
bdi04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

100500492

100799935

25493422

18094635

818065

839988

103865369

103840275

100261132

121219871

107909829

106366701

106447209

106447299

102623497

101262775

102597067

107815709

107823704

9266617

100283185

123168634

123149213

123412095

8083172

100823442

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100500492 (gma-u.5 coexpression data)

Top 50 enrichment test to 100500492 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	1	2	2	1	2	3	1	1	1	2	1	1	2	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100500492 (gma-u.5 coexpression data)

Top 50 enrichment test to 100500492 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**