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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100500629   uncharacterized LOC100500629 
 gma-r.7   100500629   uncharacterized LOC100500629 
 gma-u.5   100500133   uncharacterized LOC100500133 
 gma-u.5   100807862   histone H2A variant 1 
 gma-u.5   100796183   histone H2A variant 1 
 mtr-u.5   11429815   probable histone H2A variant 3 
 mtr-u.5   11442215   probable histone H2A variant 3 
 mtr-u.5   11421897   histone H2A variant 1 
 ppo-u.5   7471570   probable histone H2A variant 3 
 ppo-u.5   7459008   probable histone H2A variant 3 
 ppo-u.5   18096145   histone H2A variant 1 
 ath-u.5   HTA8   histone H2A 8 
 ath-u.5   HTA11   histone H2A 11 
 ath-u.5   HTA9   histone H2A protein 9 
 bra-r.6   103871193   probable histone H2A variant 3 
 bra-r.6   103863224   histone H2A variant 1 
 bra-r.6   103868480   probable histone H2A variant 3 
 vvi-u.5   100265256   probable histone H2A variant 3 
 vvi-u.5   100257988   histone H2A variant 1 
 vvi-u.5   100249276   probable histone H2A variant 3 
 ghi-r.1   121229342   probable histone H2A variant 3 
 ghi-r.1   107940216   histone H2A variant 1 
 ghi-r.1   107938788   probable histone H2A variant 3 
 bna-r.1   125598502   probable histone H2A variant 3 
 bna-r.1   106405854   probable histone H2A variant 3 
 bna-r.1   125598494   probable histone H2A variant 3 
 cit-r.1   102612477   histone H2A variant 1 
 cit-r.1   102610066   probable histone H2A variant 3 
 cit-r.1   102620198   probable histone H2A variant 3 
 sly-u.5   101256783   probable histone H2A variant 1 
 sly-u.5   101267931   probable histone H2A variant 1 
 sly-u.5   101268740   probable histone H2A variant 3 
 sot-r.1   102604745   probable histone H2A variant 1 
 sot-r.1   102591023   probable histone H2A variant 1 
 sot-r.1   102581303   probable histone H2A variant 3 
 nta-r.1   107760987   putative histone H2A variant 1 
 nta-r.1   107771657   putative histone H2A variant 3 
 nta-r.1   107771868   putative histone H2A variant 1 
 osa-u.5   4331710   probable histone H2A variant 1 
 osa-u.5   4334071   probable histone H2A variant 3 
 osa-u.5   4348638   probable histone H2A variant 2 
 zma-u.5   100273753   Histone H2A 
 zma-u.5   100383617   Histone H2A 
 tae-r.2   123166391   probable histone H2A variant 2 
 tae-r.2   123122788   probable histone H2A variant 3 
 tae-r.2   123118736   probable histone H2A variant 2 
 hvu-r.1   123452177   probable histone H2A variant 3 
 hvu-r.1   123429101   probable histone H2A variant 2 
 sbi-r.1   8059849   probable histone H2A variant 1 
 sbi-r.1   8070617   probable histone H2A variant 1 
 bdi-r.1   100840870   probable histone H2A variant 3 
 bdi-r.1   100826987   probable histone H2A variant 2 
 bdi-r.1   100824636   probable histone H2A variant 3 
 cre-r.1   CHLRE_13g567700v5   uncharacterized protein 

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Top 50 coexpressed genes to 100500629 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100500629 (gma-u.5 coexpression data)

CoexMap"100500629"


gmaLOC100500629 | Entrez gene ID : 100500629      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 3 3 3 3 3 3 3 3 3 3 3 2 3 2 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03082 [list] [network] ATP-dependent chromatin remodeling (120 genes)
GO BP
GO:0031507 [list] [network] heterochromatin formation  (77 genes)  IEA  
GO CC
GO:0000786 [list] [network] nucleosome  (104 genes)  IEA  
GO:0000785 [list] [network] chromatin  (372 genes)  IEA  
GO MF
GO:0030527 [list] [network] structural constituent of chromatin  (88 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (167 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
Protein NP_001237054.1 [sequence] [blastp]
XP_006595521.1 [sequence] [blastp]
XP_006595522.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for NP_001237054.1)
nucl 6,  cyto 3  (predict for XP_006595521.1)
chlo 5,  E.R. 2,  nucl 1,  cyto 1,  extr 1,  vacu 1,  cyto_nucl 1  (predict for XP_006595522.1)
Subcellular
localization
TargetP
other 5,  chlo 5  (predict for NP_001237054.1)
other 5,  chlo 5  (predict for XP_006595521.1)
scret 7  (predict for XP_006595522.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100500629
gma-r.7
for
100500629
gma-u.5
for
100500133
gma-u.5
for
100807862
gma-u.5
for
100796183
mtr-u.5
for
11429815
mtr-u.5
for
11442215
mtr-u.5
for
11421897
ppo-u.5
for
7471570
ppo-u.5
for
7459008
ppo-u.5
for
18096145
ath-u.5
for
HTA8
ath-u.5
for
HTA11
ath-u.5
for
HTA9
bra-r.6
for
103871193
bra-r.6
for
103863224
bra-r.6
for
103868480
vvi-u.5
for
100265256
vvi-u.5
for
100257988
vvi-u.5
for
100249276
ghi-r.1
for
121229342
ghi-r.1
for
107940216
ghi-r.1
for
107938788
bna-r.1
for
125598502
bna-r.1
for
106405854
bna-r.1
for
125598494
cit-r.1
for
102612477
cit-r.1
for
102610066
cit-r.1
for
102620198
sly-u.5
for
101256783
sly-u.5
for
101267931
sly-u.5
for
101268740
sot-r.1
for
102604745
sot-r.1
for
102591023
sot-r.1
for
102581303
nta-r.1
for
107760987
nta-r.1
for
107771657
nta-r.1
for
107771868
osa-u.5
for
4331710
osa-u.5
for
4334071
osa-u.5
for
4348638
zma-u.5
for
100273753
zma-u.5
for
100383617
tae-r.2
for
123166391
tae-r.2
for
123122788
tae-r.2
for
123118736
hvu-r.1
for
123452177
hvu-r.1
for
123429101
sbi-r.1
for
8059849
sbi-r.1
for
8070617
bdi-r.1
for
100840870
bdi-r.1
for
100826987
bdi-r.1
for
100824636
cre-r.1
for
CHLRE_13g567700v5


Ortholog ID: 793
Species gma gma gma mtr mtr mtr ppo ppo ppo ath ath ath bra bra bra vvi vvi vvi ghi ghi ghi bna bna bna cit cit cit sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi bdi cre
Symbol LOC100796183 LOC100782374 LOC100499998 LOC11429815 LOC11442215 LOC11431267 LOC18096145 LOC18107499 LOC7495754 HTA8 HTA11 HTA9 LOC103868480 LOC103840638 LOC103841363 LOC100265256 LOC100257988 LOC100249276 LOC121229342 LOC107941646 LOC107955482 LOC125598494 LOC106407449 LOC106402324 LOC102612477 LOC102610066 LOC102620198 LOC101256783 LOC101267931 LOC101268740 LOC102604745 LOC102591023 LOC102581303 LOC107760987 LOC107771657 LOC107781461 LOC4331710 LOC4334071 LOC4348638 LOC100273753 LOC103643659 LOC100216638 LOC123122788 LOC123113275 LOC123042671 LOC123452177 LOC123429101 LOC8059849 LOC110431421 LOC100840870 LOC100826987 LOC100824636 CHLRE_13g567700v5
Function* histone H2A variant 1 histone H2A variant 1 uncharacterized LOC100499998 probable histone H2A variant 3 probable histone H2A variant 3 histone H2A variant 1 histone H2A variant 1 probable histone H2A variant 3 probable histone H2A variant 3 histone H2A 8 histone H2A 11 histone H2A protein 9 probable histone H2A variant 3 probable histone H2A variant 3 histone H2A variant 1 probable histone H2A variant 3 histone H2A variant 1 probable histone H2A variant 3 probable histone H2A variant 3 histone H2A variant 1 histone H2A variant 1 probable histone H2A variant 3 histone H2A variant 1 probable histone H2A variant 3 histone H2A variant 1 probable histone H2A variant 3 probable histone H2A variant 3 probable histone H2A variant 1 probable histone H2A variant 1 probable histone H2A variant 3 probable histone H2A variant 1 probable histone H2A variant 1 probable histone H2A variant 3 putative histone H2A variant 1 putative histone H2A variant 3 putative histone H2A variant 3 probable histone H2A variant 1 probable histone H2A variant 3 probable histone H2A variant 2 Histone H2A probable histone H2A uncharacterized LOC100216638 probable histone H2A variant 3 probable histone H2A variant 3 probable histone H2A variant 2 probable histone H2A variant 3 probable histone H2A variant 2 probable histone H2A variant 1 probable histone H2A variant 3 probable histone H2A variant 3 probable histone H2A variant 2 probable histone H2A variant 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma03082 ATP-dependent chromatin remodeling 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 5
gma03030 DNA replication 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma04016 MAPK signaling pathway - plant 3
gma04070 Phosphatidylinositol signaling system 3
gma04075 Plant hormone signal transduction 3
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
mtr03082 ATP-dependent chromatin remodeling 2
mtr03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr00190 Oxidative phosphorylation 3
mtr03020 RNA polymerase 2
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
ppo04814 Motor proteins 3
ppo04145 Phagosome 2
ppo04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 5
ppo00190 Oxidative phosphorylation 2
ppo03040 Spliceosome 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 5
ath03030 DNA replication 4
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
bra03040 Spliceosome 2
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 3
bra04144 Endocytosis 2
bra04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 2
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04814 Motor proteins 4
vvi04145 Phagosome 2
vvi04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04130 SNARE interactions in vesicular transport 4
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 10
ghi03050 Proteasome 3
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 11
bna00010 Glycolysis / Gluconeogenesis 2
bna00040 Pentose and glucuronate interconversions 2
bna00053 Ascorbate and aldarate metabolism 2
bna00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 7
bna03050 Proteasome 2
bna00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 11
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 6
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
osa00230 Purine metabolism 2
osa00240 Pyrimidine metabolism 2
osa00480 Glutathione metabolism 2
osa01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 5
zma03420 Nucleotide excision repair 4
zma03430 Mismatch repair 4
zma03440 Homologous recombination 3
zma03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 6
zma04814 Motor proteins 3
zma03082 ATP-dependent chromatin remodeling 3
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 6
tae03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
hvu04145 Phagosome 2
hvu03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 6
sbi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 3
sbi04070 Phosphatidylinositol signaling system 3
sbi04075 Plant hormone signal transduction 3
sbi04626 Plant-pathogen interaction 3
sbi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 3
bdi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 4
bdi03030 DNA replication 4
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100796183 100782374 100499998 11429815 11442215 11431267 18096145 18107499 7495754 818463 824621 841707 103868480 103840638 103841363 100265256 100257988 100249276 121229342 107941646 107955482 125598494 106407449 106402324 102612477 102610066 102620198 101256783 101267931 101268740 102604745 102591023 102581303 107760987 107771657 107781461 4331710 4334071 4348638 100273753 103643659 100216638 123122788 123113275 123042671 123452177 123429101 8059849 110431421 100840870 100826987 100824636 5719077
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