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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100500945   necrotic4 
 zma-r.6   100500945   necrotic4 
 osa-u.5   4336951   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like 
 ath-u.5   LIN2   Coproporphyrinogen III oxidase 
 gma-u.5   CPX   coproporphyrinogen oxidase 
 sly-u.5   101260673   coproporphyrinogen-III oxidase 1, chloroplastic 
 vvi-u.5   100243271   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 
 ppo-u.5   7485528   coproporphyrinogen-III oxidase 1, chloroplastic 
 mtr-u.5   11425298   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 

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Top 50 coexpressed genes to 100500945 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100500945 (zma-u.5 coexpression data)

CoexMap"100500945"


zmaLOC100500945 | Entrez gene ID : 100500945      
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00860 [list] [network] Porphyrin metabolism (67 genes)
zma01240 [list] [network] Biosynthesis of cofactors (295 genes)
GO BP
GO:0006782 [list] [network] protoporphyrinogen IX biosynthetic process  (1 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (118 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5465 genes)  IEA  
GO MF
GO:0004109 [list] [network] coproporphyrinogen oxidase activity  (2 genes)  IEA  
Protein NP_001182777.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_001182777.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001182777.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100500945
zma-r.6
for
100500945
osa-u.5
for
4336951
ath-u.5
for
LIN2
gma-u.5
for
CPX
sly-u.5
for
101260673
vvi-u.5
for
100243271
ppo-u.5
for
7485528
mtr-u.5
for
11425298


Ortholog ID: 5897
Species zma sbi sbi osa tae tae hvu hvu bdi bdi ath gma sly bra bra vvi ppo mtr ghi ghi bna bna sot sot cit nta nta cre
Symbol LOC100500945 LOC8085159 LOC8063950 LOC4336951 LOC123054338 LOC123144728 LOC123403778 LOC123427648 LOC100832294 LOC100830026 LIN2 CPX LOC101260673 LOC103843696 LOC103844502 LOC100243271 LOC7485528 LOC11425298 LOC107915439 LOC107950258 LOC106401564 LOC106423089 LOC102595391 LOC102600601 LOC102614806 LOC107815524 LOC107766888 CHLRE_02g085450v5
Function* necrotic4 oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like Coproporphyrinogen III oxidase coproporphyrinogen oxidase coproporphyrinogen-III oxidase 1, chloroplastic coproporphyrinogen-III oxidase 1, chloroplastic coproporphyrinogen-III oxidase 1, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic coproporphyrinogen-III oxidase 1, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic coproporphyrinogen-III oxidase 1, chloroplastic-like coproporphyrinogen-III oxidase 1, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like coproporphyrinogen-III oxidase 1, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
zma01230 Biosynthesis of amino acids 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 7
sbi01240 Biosynthesis of cofactors 6
sbi00010 Glycolysis / Gluconeogenesis 5
sbi00071 Fatty acid degradation 2
sbi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa01240 Biosynthesis of cofactors 3
osa00970 Aminoacyl-tRNA biosynthesis 3
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00710 Carbon fixation by Calvin cycle 2
tae01200 Carbon metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 5
tae01200 Carbon metabolism 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00710 Carbon fixation by Calvin cycle 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
hvu00860 Porphyrin metabolism 4
hvu01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
bdi00860 Porphyrin metabolism 3
bdi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 11
ath01240 Biosynthesis of cofactors 9
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 7
gma01240 Biosynthesis of cofactors 7
gma03060 Protein export 2
gma03010 Ribosome 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 7
sly01240 Biosynthesis of cofactors 7
sly03010 Ribosome 4
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 3
bra03040 Spliceosome 3
bra00860 Porphyrin metabolism 3
bra01240 Biosynthesis of cofactors 3
bra00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
bra00860 Porphyrin metabolism 3
bra01240 Biosynthesis of cofactors 3
bra03060 Protein export 2
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 2
ppo00290 Valine, leucine and isoleucine biosynthesis 2
ppo00770 Pantothenate and CoA biosynthesis 2
ppo01210 2-Oxocarboxylic acid metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 6
mtr01240 Biosynthesis of cofactors 6
mtr03010 Ribosome 2
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 5
ghi01240 Biosynthesis of cofactors 5
ghi03010 Ribosome 4
ghi04626 Plant-pathogen interaction 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
ghi01240 Biosynthesis of cofactors 4
ghi00710 Carbon fixation by Calvin cycle 3
ghi01200 Carbon metabolism 3
ghi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 5
sot01240 Biosynthesis of cofactors 5
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 9
sot01240 Biosynthesis of cofactors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 3
cit01240 Biosynthesis of cofactors 3
cit03010 Ribosome 3
cit00010 Glycolysis / Gluconeogenesis 3
cit00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 5
nta00860 Porphyrin metabolism 4
nta00061 Fatty acid biosynthesis 2
nta00620 Pyruvate metabolism 2
nta00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
nta01240 Biosynthesis of cofactors 4
nta00260 Glycine, serine and threonine metabolism 3
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
nta01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 9
cre01240 Biosynthesis of cofactors 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100500945 8085159 8063950 4336951 123054338 123144728 123403778 123427648 100832294 100830026 839489 100818277 101260673 103843696 103844502 100243271 7485528 11425298 107915439 107950258 106401564 106423089 102595391 102600601 102614806 107815524 107766888 5727381
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