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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   CYP28   peptidyl-prolyl cis-trans isomerase CYP28 
 gma-r.7   CYP28   peptidyl-prolyl cis-trans isomerase CYP28 
 gma-m.5   CYP28   peptidyl-prolyl cis-trans isomerase CYP28 
 gma-u.5   CYP14   peptidyl-prolyl cis-trans isomerase CYP14 
 gma-u.5   CYP12   peptidyl-prolyl cis-trans isomerase CYP12 
 mtr-u.5   11423421   peptidyl-prolyl cis-trans isomerase, chloroplastic 
 mtr-u.5   25484726   peptidyl-prolyl cis-trans isomerase, chloroplastic 
 ppo-u.5   7487769   uncharacterized LOC7487769 
 ath-u.5   ROC4   rotamase CYP 4 
 bra-r.6   103862800   peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic 
 bra-r.6   103842032   peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic 
 vvi-u.5   100250386   peptidyl-prolyl cis-trans isomerase 
 ghi-r.1   107910542   peptidyl-prolyl cis-trans isomerase A1 
 ghi-r.1   107897163   peptidyl-prolyl cis-trans isomerase A1 
 bna-r.1   106444986   peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic-like 
 bna-r.1   106415564   peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic 
 bna-r.1   106396794   peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic-like 
 cit-r.1   102610362   uncharacterized LOC102610362 
 osa-u.5   4327912   peptidyl-prolyl cis-trans isomerase A1 
 zma-u.5   103634647   peptidyl-prolyl cis-trans isomerase-like 
 tae-r.2   123077845   peptidyl-prolyl cis-trans isomerase 
 tae-r.2   123069323   peptidyl-prolyl cis-trans isomerase 
 tae-r.2   123060766   peptidyl-prolyl cis-trans isomerase 
 hvu-r.1   123443228   peptidyl-prolyl cis-trans isomerase, chloroplastic-like 
 sbi-r.1   8054689   peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic 
 bdi-r.1   100838780   peptidyl-prolyl cis-trans isomerase 
 cre-r.1   CHLRE_12g544150v5   uncharacterized protein 
 cre-r.1   CHLRE_12g544114v5   uncharacterized protein 

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Top 50 coexpressed genes to CYP28 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CYP28 (gma-u.5 coexpression data)

CoexMap"100526955"


gmaCYP28 | Entrez gene ID : 100526955      
Species gma mtr ppo ath bra vvi ghi bna cit osa zma tae hvu sbi bdi cre nta sly sot
Paralog 5 2 1 1 2 1 2 3 1 1 1 3 1 1 1 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000413 [list] [network] protein peptidyl-prolyl isomerization  (66 genes)  IEA  
GO:0006457 [list] [network] protein folding  (329 genes)  IEA  
GO CC
GO MF
GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity  (112 genes)  IEA  
Protein NP_001344083.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_001344083.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001344083.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
CYP28
gma-r.7
for
CYP28
gma-m.5
for
CYP28
gma-u.5
for
CYP14
gma-u.5
for
CYP12
mtr-u.5
for
11423421
mtr-u.5
for
25484726
ppo-u.5
for
7487769
ath-u.5
for
ROC4
bra-r.6
for
103862800
bra-r.6
for
103842032
vvi-u.5
for
100250386
ghi-r.1
for
107910542
ghi-r.1
for
107897163
bna-r.1
for
106444986
bna-r.1
for
106415564
bna-r.1
for
106396794
cit-r.1
for
102610362
osa-u.5
for
4327912
zma-u.5
for
103634647
tae-r.2
for
123077845
tae-r.2
for
123069323
tae-r.2
for
123060766
hvu-r.1
for
123443228
sbi-r.1
for
8054689
bdi-r.1
for
100838780
cre-r.1
for
CHLRE_12g544150v5
cre-r.1
for
CHLRE_12g544114v5


Ortholog ID: 8996
Species gma gma gma mtr mtr ppo ath bra bra vvi ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi cre cre
Symbol CYP28 CYP14 CYP12 LOC11423421 LOC25484726 LOC7487769 ROC4 LOC103862800 LOC103842032 LOC100250386 LOC107910542 LOC107897163 LOC106444986 LOC106415564 LOC106396794 LOC102610362 LOC4327912 LOC103634647 LOC123077845 LOC123069323 LOC123060766 LOC123443228 LOC8054689 LOC100838780 CHLRE_12g544150v5 CHLRE_12g544114v5
Function* peptidyl-prolyl cis-trans isomerase CYP28 peptidyl-prolyl cis-trans isomerase CYP14 peptidyl-prolyl cis-trans isomerase CYP12 peptidyl-prolyl cis-trans isomerase, chloroplastic peptidyl-prolyl cis-trans isomerase, chloroplastic uncharacterized LOC7487769 rotamase CYP 4 peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic peptidyl-prolyl cis-trans isomerase peptidyl-prolyl cis-trans isomerase A1 peptidyl-prolyl cis-trans isomerase A1 peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic-like peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic-like uncharacterized LOC102610362 peptidyl-prolyl cis-trans isomerase A1 peptidyl-prolyl cis-trans isomerase-like peptidyl-prolyl cis-trans isomerase peptidyl-prolyl cis-trans isomerase peptidyl-prolyl cis-trans isomerase peptidyl-prolyl cis-trans isomerase, chloroplastic-like peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic peptidyl-prolyl cis-trans isomerase uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma01230 Biosynthesis of amino acids 4
gma00010 Glycolysis / Gluconeogenesis 2
gma00051 Fructose and mannose metabolism 2
gma00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00051 Fructose and mannose metabolism 2
gma00230 Purine metabolism 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00860 Porphyrin metabolism 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 6
bra01240 Biosynthesis of cofactors 6
bra00250 Alanine, aspartate and glutamate metabolism 5
bra01232 Nucleotide metabolism 5
bra01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 5
bra00195 Photosynthesis 5
bra00710 Carbon fixation by Calvin cycle 4
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 3
vvi03010 Ribosome 3
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 6
ghi01230 Biosynthesis of amino acids 5
ghi00030 Pentose phosphate pathway 4
ghi01200 Carbon metabolism 4
ghi00051 Fructose and mannose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 5
ghi03010 Ribosome 4
ghi00010 Glycolysis / Gluconeogenesis 4
ghi00051 Fructose and mannose metabolism 4
ghi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 3
bna00220 Arginine biosynthesis 2
bna01210 2-Oxocarboxylic acid metabolism 2
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 6
bna00300 Lysine biosynthesis 4
bna00220 Arginine biosynthesis 2
bna01210 2-Oxocarboxylic acid metabolism 2
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 4
osa00220 Arginine biosynthesis 3
osa00250 Alanine, aspartate and glutamate metabolism 2
osa01210 2-Oxocarboxylic acid metabolism 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
bdi03018 RNA degradation 3
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100526955 100785805 100775978 11423421 25484726 7487769 825376 103862800 103842032 100250386 107910542 107897163 106444986 106415564 106396794 102610362 4327912 103634647 123077845 123069323 123060766 123443228 8054689 100838780 66055744 5719552
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