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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100527314   single-stranded DNA-bindig protein WHY2-like protein 
 gma-r.7   100527314   single-stranded DNA-bindig protein WHY2-like protein 
 gma-u.5   100775220   single-stranded DNA-binding protein WHY1, chloroplastic 
 gma-u.5   100789252   single-stranded DNA-binding protein WHY1, chloroplastic 
 gma-u.5   100797370   single-stranded DNA-binding protein WHY1, chloroplastic 
 mtr-u.5   25502758   single-stranded DNA-binding protein WHY1, chloroplastic 
 mtr-u.5   11433338   single-stranded DNA-binding protein WHY2, mitochondrial 
 mtr-u.5   11413967   single-stranded DNA-binding protein WHY1, chloroplastic 
 ppo-u.5   7459041   single-stranded DNA-binding protein WHY1, chloroplastic 
 ppo-u.5   7457857   single-stranded DNA-binding protein WHY1, chloroplastic 
 ppo-u.5   7483546   single-stranded DNA-binding protein WHY2, mitochondrial 
 ath-u.5   WHY3   ssDNA-binding transcriptional regulator 
 ath-u.5   WHY1   ssDNA-binding transcriptional regulator 
 ath-u.5   ATWHY2   WHIRLY 2 
 vvi-u.5   100258449   single-stranded DNA-binding protein WHY2, mitochondrial 
 vvi-u.5   100253653   single-stranded DNA-binding protein WHY1, chloroplastic 
 sly-u.5   WHY1   DNA-binding protein WHY1 
 sly-u.5   101252048   mtDNA-binding protein WHIRLY2-like 
 osa-u.5   4340109   single-stranded DNA-binding protein WHY1, chloroplastic 
 osa-u.5   4328365   single-stranded DNA-binding protein WHY2, mitochondrial 
 zma-u.5   100286229   uncharacterized LOC100286229 

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Top 50 coexpressed genes to 100527314 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100527314 (gma-u.5 coexpression data)

CoexMap"100527314"


gmaLOC100527314 | Entrez gene ID : 100527314    
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 3 3 3 2 2 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006952 [list] [network] defense response  (700 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (3122 genes)  IEA  
GO CC
GO MF
GO:0003697 [list] [network] single-stranded DNA binding  (161 genes)  IEA  
Protein NP_001341889.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001341889.1)
Subcellular
localization
TargetP
mito 7  (predict for NP_001341889.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100527314
gma-r.7
for
100527314
gma-u.5
for
100775220
gma-u.5
for
100789252
gma-u.5
for
100797370
mtr-u.5
for
25502758
mtr-u.5
for
11433338
mtr-u.5
for
11413967
ppo-u.5
for
7459041
ppo-u.5
for
7457857
ppo-u.5
for
7483546
ath-u.5
for
WHY3
ath-u.5
for
WHY1
ath-u.5
for
ATWHY2
vvi-u.5
for
100258449
vvi-u.5
for
100253653
sly-u.5
for
WHY1
sly-u.5
for
101252048
osa-u.5
for
4340109
osa-u.5
for
4328365
zma-u.5
for
100286229


Ortholog ID: 2528
Species gma gma mtr mtr ppo ppo ath ath bra bra vvi vvi ghi ghi bna bna cit cit sly sly sot sot nta nta osa osa zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC100789252 LOC100775220 LOC25502758 LOC11433338 LOC7457857 LOC7483546 WHY1 ATWHY2 LOC103827509 LOC103831651 LOC100258449 LOC100253653 LOC107909129 LOC107894079 LOC106407445 LOC106369337 LOC102610089 LOC102613455 WHY1 LOC101252048 LOC102577544 LOC102577630 LOC107825932 LOC107828401 LOC4340109 LOC4328365 LOC100286229 LOC123150714 LOC123136394 LOC123401117 LOC123410098 LOC8068770 LOC8074659 LOC100824321 LOC100825843 CHLRE_02g091550v5
Function* single-stranded DNA-binding protein WHY1, chloroplastic single-stranded DNA-binding protein WHY1, chloroplastic single-stranded DNA-binding protein WHY1, chloroplastic single-stranded DNA-binding protein WHY2, mitochondrial single-stranded DNA-binding protein WHY1, chloroplastic single-stranded DNA-binding protein WHY2, mitochondrial ssDNA-binding transcriptional regulator WHIRLY 2 single-stranded DNA-binding protein WHY3, chloroplastic single-stranded DNA-binding protein WHY2, mitochondrial single-stranded DNA-binding protein WHY2, mitochondrial single-stranded DNA-binding protein WHY1, chloroplastic single-stranded DNA-binding protein WHY2, mitochondrial single-stranded DNA-binding protein WHY1, chloroplastic single-stranded DNA-binding protein WHY3, chloroplastic-like single-stranded DNA-binding protein WHY3, chloroplastic single-stranded DNA-binding protein WHY1, chloroplastic single-stranded DNA-binding protein WHY2, mitochondrial DNA-binding protein WHY1 mtDNA-binding protein WHIRLY2-like DNA-binding protein p24 Why2 protein single-stranded DNA-binding protein WHY2, mitochondrial single-stranded DNA-binding protein WHY2, mitochondrial single-stranded DNA-binding protein WHY1, chloroplastic single-stranded DNA-binding protein WHY2, mitochondrial uncharacterized LOC100286229 single-stranded DNA-binding protein WHY1, chloroplastic single-stranded DNA-binding protein WHY2, mitochondrial single-stranded DNA-binding protein WHY2, mitochondrial single-stranded DNA-binding protein WHY1, chloroplastic-like single-stranded DNA-binding protein WHY1, chloroplastic single-stranded DNA-binding protein WHY2, mitochondrial single-stranded DNA-binding protein WHY1, chloroplastic single-stranded DNA-binding protein WHY2, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 2
gma00620 Pyruvate metabolism 2
gma00640 Propanoate metabolism 2
gma01200 Carbon metabolism 2
gma01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 3
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 3
ppo00300 Lysine biosynthesis 2
ppo00470 D-Amino acid metabolism 2
ppo01230 Biosynthesis of amino acids 2
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00340 Histidine metabolism 2
ath00350 Tyrosine metabolism 2
ath00360 Phenylalanine metabolism 2
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ath00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
vvi01240 Biosynthesis of cofactors 2
vvi01210 2-Oxocarboxylic acid metabolism 2
vvi01230 Biosynthesis of amino acids 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 5
nta03040 Spliceosome 3
nta03013 Nucleocytoplasmic transport 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
osa03030 DNA replication 2
osa03410 Base excision repair 2
osa03082 ATP-dependent chromatin remodeling 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00261 Monobactam biosynthesis 2
tae00300 Lysine biosynthesis 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
bdi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100789252 100775220 25502758 11433338 7457857 7483546 838003 843467 103827509 103831651 100258449 100253653 107909129 107894079 106407445 106369337 102610089 102613455 101258558 101252048 102577544 102577630 107825932 107828401 4340109 4328365 100286229 123150714 123136394 123401117 123410098 8068770 8074659 100824321 100825843 5727487
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