ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100527878	uncharacterized LOC100527878
gma-r.7	100527878	uncharacterized LOC100527878
gma-m.5	100527878	uncharacterized LOC100527878
gma-u.5	100527478	uncharacterized LOC100527478
gma-u.5	100500495	uncharacterized LOC100500495
mtr-u.5	25501970	succinate dehydrogenase assembly factor 2, mitochondrial
mtr-u.5	11434550	succinate dehydrogenase assembly factor 2, mitochondrial
ppo-u.5	7457586	succinate dehydrogenase assembly factor 2, mitochondrial
ath-u.5	SDHAF2	succinate dehydrogenase assembly factor
vvi-u.5	100259710	succinate dehydrogenase assembly factor 2, mitochondrial
sly-u.5	101244854	succinate dehydrogenase assembly factor 2, mitochondrial
osa-u.5	4350629	succinate dehydrogenase assembly factor 2, mitochondrial
zma-u.5	103654411	TPR repeat region family protein
zma-u.5	103648030	succinate dehydrogenase assembly factor 2, mitochondrial

Annotation

functional annotation

KEGG

GO BP

GO:0018293 [list] [network] protein-FAD linkage	(3 genes)	IEA
GO:0034553 [list] [network] mitochondrial respiratory chain complex II assembly	(6 genes)	IEA
GO:0006121 [list] [network] mitochondrial electron transport, succinate to ubiquinone	(11 genes)	IEA
GO:0006099 [list] [network] tricarboxylic acid cycle	(87 genes)	IEA

GO CC

GO:0005739 [list] [network] mitochondrion

(1058 genes)

IEA

GO MF

Protein

NP_001235051.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 6, chlo_mito 4, cyto_mito 4, nucl 2

(predict for NP_001235051.1)

Subcellular
localization
TargetP

mito 6

(predict for NP_001235051.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100527878	gma-r.7 for 100527878	gma-m.5 for 100527878	gma-u.5 for 100527478	gma-u.5 for 100500495	mtr-u.5 for 25501970	mtr-u.5 for 11434550	ppo-u.5 for 7457586	ath-u.5 for SDHAF2	vvi-u.5 for 100259710	sly-u.5 for 101244854	osa-u.5 for 4350629	zma-u.5 for 103654411	zma-u.5 for 103648030

Ortholog

Ortholog ID: 6101

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

SDHAF2

Function^*

uncharacterized LOC100527878

uncharacterized LOC100500495

succinate dehydrogenase assembly factor 2, mitochondrial

succinate dehydrogenase assembly factor

succinate dehydrogenase assembly factor 2, mitochondrial

TPR repeat region family protein

succinate dehydrogenase assembly factor 2, mitochondrial

succinate dehydrogenase assembly factor 2, mitochondrial-like

succinate dehydrogenase assembly factor 2, mitochondrial

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	5
mtr00520	Amino sugar and nucleotide sugar metabolism	2
mtr01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	4
ath00020	Citrate cycle (TCA cycle)	3
ath01200	Carbon metabolism	3
ath00480	Glutathione metabolism	2
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	6
nta00020	Citrate cycle (TCA cycle)	3
nta01200	Carbon metabolism	3
nta00620	Pyruvate metabolism	2
nta00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	3
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01230	Biosynthesis of amino acids	4
sbi00710	Carbon fixation by Calvin cycle	3
sbi01200	Carbon metabolism	3
sbi00190	Oxidative phosphorylation	3
sbi00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01200	Carbon metabolism	4
cre00630	Glyoxylate and dicarboxylate metabolism	3
cre00620	Pyruvate metabolism	3
cre00010	Glycolysis / Gluconeogenesis	2
cre00640	Propanoate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100527878

100500495

25501970

11434550

7457586

835177

103864866

103852168

100259710

107953591

106361176

106402770

102619131

101244854

102604677

107769180

4350629

103654411

103648030

123113731

123123242

123452766

8083167

100830558

5719657

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100527878 (gma-u.5 coexpression data)

Top 50 enrichment test to 100527878 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	5	2	1	1	1	1	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100527878 (gma-u.5 coexpression data)

Top 50 enrichment test to 100527878 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**