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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100775475   ATP-dependent DNA helicase 2 subunit KU70 
 gma-r.7   100775475   ATP-dependent DNA helicase 2 subunit KU70 
 gma-m.5   100775475   ATP-dependent DNA helicase 2 subunit KU70 
 mtr-u.5   11441760   ATP-dependent DNA helicase 2 subunit KU70 
 ppo-u.5   7472336   ATP-dependent DNA helicase 2 subunit KU70 
 ath-u.5   KU70   ATP-dependent DNA helicase 2 subunit Ku70-like protein 
 vvi-u.5   100265198   ATP-dependent DNA helicase 2 subunit KU70 
 sly-u.5   101260670   ATP-dependent DNA helicase 2 subunit KU70 
 osa-u.5   4342584   ATP-dependent DNA helicase 2 subunit KU70-like 
 zma-u.5   100381505   ATP-dependent DNA helicase 2 subunit KU70 

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Top 50 coexpressed genes to 100775475 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100775475 (gma-u.5 coexpression data)

CoexMap"100775475"


gmaLOC100775475 | Entrez gene ID : 100775475      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03450 [list] [network] Non-homologous end-joining (10 genes)
GO BP
GO:0006303 [list] [network] double-strand break repair via nonhomologous end joining  (14 genes)  IEA  
GO:0000723 [list] [network] telomere maintenance  (122 genes)  IEA  
GO CC
GO:0043564 [list] [network] Ku70:Ku80 complex  (2 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0003678 [list] [network] DNA helicase activity  (87 genes)  IEA  
GO:0042162 [list] [network] telomeric DNA binding  (100 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (116 genes)  IEA  
GO:0003690 [list] [network] double-stranded DNA binding  (950 genes)  IEA  
Protein XP_006606601.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  chlo 1,  golg 1  (predict for XP_006606601.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006606601.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100775475

.
gma-r.7
for
100775475

.
gma-m.5
for
100775475

.
mtr-u.5
for
11441760

.
ppo-u.5
for
7472336

.
ath-u.5
for
KU70

.
vvi-u.5
for
100265198

.
sly-u.5
for
101260670

.
osa-u.5
for
4342584

.
zma-u.5
for
100381505

.


Ortholog ID: 9781
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol KU70 LOC100775475 LOC101260670 LOC4342584 LOC100381505 LOC103872484 LOC100265198 LOC7472336 LOC11441760 LOC123102253 LOC123119433 LOC123395481 LOC107917996 LOC107934687 LOC106365562 LOC106346736 CHLRE_13g607500v5 LOC8060759 LOC8081583 LOC102580271 LOC102627949 LOC100829027 LOC107815516 LOC107780513
Function* ATP-dependent DNA helicase 2 subunit Ku70-like protein ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70-like ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70-like ATP-dependent DNA helicase 2 subunit KU70 uncharacterized protein ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70 ATP-dependent DNA helicase 2 subunit KU70-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 2
sly03440 Homologous recombination 2
sly03410 Base excision repair 2
sly03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 4
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03450 Non-homologous end-joining 5
tae03410 Base excision repair 2
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
tae03450 Non-homologous end-joining 3
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03450 Non-homologous end-joining 4
ghi03083 Polycomb repressive complex 3
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03450 Non-homologous end-joining 4
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03450 Non-homologous end-joining 4
bna04016 MAPK signaling pathway - plant 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03450 Non-homologous end-joining 4
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03440 Homologous recombination 2
cre03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03450 Non-homologous end-joining 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 5
sot03450 Non-homologous end-joining 3
sot03460 Fanconi anemia pathway 3
sot03410 Base excision repair 2
sot03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 6
nta03460 Fanconi anemia pathway 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 4
nta03030 DNA replication 4
nta03410 Base excision repair 4
nta03420 Nucleotide excision repair 4
nta03430 Mismatch repair 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838268 100775475 101260670 4342584 100381505 103872484 100265198 7472336 11441760 123102253 123119433 123395481 107917996 107934687 106365562 106346736 5724650 8060759 8081583 102580271 102627949 100829027 107815516 107780513
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