Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100775643   pentatricopeptide repeat-containing protein At5g50280, chloroplastic 
 gma-r.7   100775643   pentatricopeptide repeat-containing protein At5g50280, chloroplastic 
 gma-u.5   100810527   pentatricopeptide repeat-containing protein At5g50280, chloroplastic 
 gma-u.5   100788628   pentatricopeptide repeat-containing protein At5g50280, chloroplastic 
 mtr-u.5   11432071   pentatricopeptide repeat-containing protein At5g50280, chloroplastic 
 ppo-u.5   7484442   pentatricopeptide repeat-containing protein At5g50280, chloroplastic 
 ath-u.5   EMB1006   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100241526   pentatricopeptide repeat-containing protein At5g50280, chloroplastic-like 
 sly-u.5   101255679   pentatricopeptide repeat-containing protein At5g50280, chloroplastic 
 osa-u.5   4338318   pentatricopeptide repeat-containing protein At5g50280, chloroplastic 
 zma-u.5   103651237   pentatricopeptide repeat-containing protein At5g50280, chloroplastic 

close


Top 50 coexpressed genes to 100775643 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100775643 (gma-u.5 coexpression data)

CoexMap"100775643"


gmaLOC100775643 | Entrez gene ID : 100775643      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003540667.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 2,  nucl 1,  cyto_pero 1  (predict for XP_003540667.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003540667.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100775643

.
gma-r.7
for
100775643

.
gma-u.5
for
100810527

.
gma-u.5
for
100788628

.
mtr-u.5
for
11432071

.
ppo-u.5
for
7484442

.
ath-u.5
for
EMB1006

.
vvi-u.5
for
100241526

.
sly-u.5
for
101255679

.
osa-u.5
for
4338318

.
zma-u.5
for
103651237

.


Ortholog ID: 10376
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol EMB1006 LOC100810527 LOC100788628 LOC101255679 LOC4338318 LOC103651237 LOC103858442 LOC100241526 LOC7484442 LOC11432071 LOC123188998 LOC123053090 LOC123426476 LOC121219335 LOC107953564 LOC106388418 LOC106388479 LOC8055577 LOC102603626 LOC102613269 LOC100824950 LOC107820321 LOC107830880
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g50280, chloroplastic pentatricopeptide repeat-containing protein At5g50280, chloroplastic pentatricopeptide repeat-containing protein At5g50280, chloroplastic pentatricopeptide repeat-containing protein At5g50280, chloroplastic pentatricopeptide repeat-containing protein At5g50280, chloroplastic pentatricopeptide repeat-containing protein At5g50280, chloroplastic pentatricopeptide repeat-containing protein At5g50280, chloroplastic-like pentatricopeptide repeat-containing protein At5g50280, chloroplastic pentatricopeptide repeat-containing protein At5g50280, chloroplastic pentatricopeptide repeat-containing protein At5g50280, chloroplastic pentatricopeptide repeat-containing protein At5g50280, chloroplastic pentatricopeptide repeat-containing protein At5g50280, chloroplastic pentatricopeptide repeat-containing protein At5g50280, chloroplastic pentatricopeptide repeat-containing protein At5g50280, chloroplastic pentatricopeptide repeat-containing protein At5g50280, chloroplastic-like pentatricopeptide repeat-containing protein At5g50280, chloroplastic pentatricopeptide repeat-containing protein At5g50280, chloroplastic pentatricopeptide repeat-containing protein At5g50280, chloroplastic pentatricopeptide repeat-containing protein At5g50280, chloroplastic pentatricopeptide repeat-containing protein At5g50280, chloroplastic uncharacterized LOC107820321 uncharacterized LOC107830880
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 4
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 6
tae01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 6
tae01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 3
bdi00500 Starch and sucrose metabolism 3
bdi00630 Glyoxylate and dicarboxylate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835093 100810527 100788628 101255679 4338318 103651237 103858442 100241526 7484442 11432071 123188998 123053090 123426476 121219335 107953564 106388418 106388479 8055577 102603626 102613269 100824950 107820321 107830880
The preparation time of this page was 0.1 [sec].