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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   MEF3   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103844068   pentatricopeptide repeat-containing protein At1g06140, mitochondrial 
 vvi-u.5   100247030   pentatricopeptide repeat-containing protein At1g06140, mitochondrial 
 ghi-r.1   107922706   pentatricopeptide repeat-containing protein At1g06140, mitochondrial 
 ghi-r.1   107923183   pentatricopeptide repeat-containing protein At1g06140, mitochondrial 
 bna-r.1   106410141   pentatricopeptide repeat-containing protein At1g06140, mitochondrial-like 
 bna-r.1   125575364   pentatricopeptide repeat-containing protein At1g06140, mitochondrial-like 

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Top 50 coexpressed genes to MEF3 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MEF3 (ath-u.5 coexpression data)

CoexMap"100775787"


gmaLOC100775787 | Entrez gene ID : 100775787      
Species ath bra vvi ghi bna hvu tae sbi sly zma bdi cre ppo nta osa mtr cit sot gma
Paralog 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_014629741.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_014629741.1)
Subcellular
localization
TargetP
other 3  (predict for XP_014629741.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
MEF3
bra-r.6
for
103844068
vvi-u.5
for
100247030
ghi-r.1
for
107922706
ghi-r.1
for
107923183
bna-r.1
for
106410141
bna-r.1
for
125575364


Ortholog ID: 16843
Species ath bra vvi ghi ghi bna bna
Symbol MEF3 LOC103844068 LOC100247030 LOC107922706 LOC107923183 LOC106410141 LOC125575364
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g06140, mitochondrial pentatricopeptide repeat-containing protein At1g06140, mitochondrial pentatricopeptide repeat-containing protein At1g06140, mitochondrial pentatricopeptide repeat-containing protein At1g06140, mitochondrial pentatricopeptide repeat-containing protein At1g06140, mitochondrial-like pentatricopeptide repeat-containing protein At1g06140, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 3
ghi00730 Thiamine metabolism 3
ghi01232 Nucleotide metabolism 3
ghi01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837123 103844068 100247030 107922706 107923183 106410141 125575364
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