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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100775894   AT-rich interactive domain-containing protein 4 
 gma-r.7   100775894   AT-rich interactive domain-containing protein 4 
 gma-u.5   100808357   AT-rich interactive domain-containing protein 4 
 gma-u.5   100816540   AT-rich interactive domain-containing protein 4 
 gma-u.5   100820590   AT-rich interactive domain-containing protein 4 
 mtr-u.5   11443291   AT-rich interactive domain-containing protein 4 
 mtr-u.5   11445678   AT-rich interactive domain-containing protein 4 
 mtr-u.5   11446975   AT-rich interactive domain-containing protein 4 
 ppo-u.5   18100272   AT-rich interactive domain-containing protein 4 
 ppo-u.5   7490525   AT-rich interactive domain-containing protein 4 
 ath-u.5   AT3G43240   ARID/BRIGHT DNA-binding domain-containing protein 
 vvi-u.5   100251584   AT-rich interactive domain-containing protein 4 
 vvi-u.5   100262830   AT-rich interactive domain-containing protein 4 
 sly-u.5   101260515   AT-rich interactive domain-containing protein 4 
 osa-u.5   4347140   AT-rich interactive domain-containing protein 4 
 osa-u.5   4345731   AT-rich interactive domain-containing protein 4 
 osa-u.5   4345729   AT-rich interactive domain-containing protein 4 
 zma-u.5   103647451   AT-rich interactive domain-containing protein 4 
 zma-u.5   100279908   uncharacterized LOC100279908 
 zma-u.5   100191457   uncharacterized LOC100191457 

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Top 50 coexpressed genes to 100775894 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100775894 (gma-u.5 coexpression data)

CoexMap"100775894"


gmaLOC100775894 | Entrez gene ID : 100775894      
Species gma mtr ppo ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 5 3 2 1 2 1 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
Protein XP_003546529.2 [sequence] [blastp]
XP_040869635.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 4,  nucl 2,  E.R._vacu 2,  golg 1,  nucl_plas 1  (predict for XP_003546529.2)
chlo 3,  vacu 3,  nucl 2,  mito 1,  plas 1,  pero 1,  mito_plas 1  (predict for XP_040869635.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_003546529.2)
other 5  (predict for XP_040869635.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100775894

.
gma-r.7
for
100775894

.
gma-u.5
for
100808357

.
gma-u.5
for
100816540

.
gma-u.5
for
100820590

.
mtr-u.5
for
11443291

.
mtr-u.5
for
11445678

.
mtr-u.5
for
11446975

.
ppo-u.5
for
18100272

.
ppo-u.5
for
7490525

.
ath-u.5
for
AT3G43240

.
vvi-u.5
for
100251584

.
vvi-u.5
for
100262830

.
sly-u.5
for
101260515

.
osa-u.5
for
4347140

.
osa-u.5
for
4345731

.
osa-u.5
for
4345729

.
zma-u.5
for
103647451

.
zma-u.5
for
100279908

.
zma-u.5
for
100191457

.


Ortholog ID: 4396
Species ath gma gma sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna cre sbi sbi sot cit bdi bdi nta nta
Symbol AT3G43240 LOC100820590 LOC100816540 LOC101260515 LOC4347140 LOC4345378 LOC100279908 LOC103647451 LOC103848026 LOC100262830 LOC100251584 LOC18100272 LOC7490525 LOC11443291 LOC11445678 LOC123103791 LOC123112017 LOC123397685 LOC107958819 LOC107961641 LOC111198785 CHLRE_10g429880v5 LOC8077881 LOC110432681 LOC102586778 LOC102611670 LOC100821621 LOC100844696 LOC107763227 LOC107799264
Function* ARID/BRIGHT DNA-binding domain-containing protein AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 uncharacterized LOC100279908 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 uncharacterized protein AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4-like AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4 AT-rich interactive domain-containing protein 4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath05100 Bacterial invasion of epithelial cells 3
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma03083 Polycomb repressive complex 2
zma03250 Viral life cycle - HIV-1 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi04148 Efferocytosis 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 6
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 4
cre00020 Citrate cycle (TCA cycle) 3
cre00640 Propanoate metabolism 2
cre00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 5
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 3
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823399 100820590 100816540 101260515 4347140 4345378 100279908 103647451 103848026 100262830 100251584 18100272 7490525 11443291 11445678 123103791 123112017 123397685 107958819 107961641 111198785 5728104 8077881 110432681 102586778 102611670 100821621 100844696 107763227 107799264
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