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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100776142   putative E3 ubiquitin-protein ligase LIN-1 
 gma-r.7   100776142   putative E3 ubiquitin-protein ligase LIN-1 
 gma-m.5   100776142   putative E3 ubiquitin-protein ligase LIN-1 
 mtr-u.5   11418360   putative E3 ubiquitin-protein ligase LIN 
 ppo-u.5   7493976   putative E3 ubiquitin-protein ligase LIN-1 
 vvi-u.5   100245471   putative E3 ubiquitin-protein ligase LIN-1 
 sly-u.5   101245353   putative E3 ubiquitin-protein ligase LIN-1 

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Top 50 coexpressed genes to 100776142 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100776142 (gma-u.5 coexpression data)

CoexMap"100776142"


gmaLOC100776142 | Entrez gene ID : 100776142      
Species gma mtr ppo vvi sly hvu osa sot tae nta bra cit ghi zma bna bdi ath sbi cre
Paralog 3 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (610 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (548 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003536276.1 [sequence] [blastp]
XP_014618773.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  chlo 1,  vacu 1,  cysk 1,  chlo_mito 1  (predict for XP_003536276.1)
nucl 5,  cyto 2,  chlo 1,  vacu 1,  cysk 1,  chlo_mito 1  (predict for XP_014618773.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003536276.1)
other 7  (predict for XP_014618773.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100776142

.
gma-r.7
for
100776142

.
gma-m.5
for
100776142

.
mtr-u.5
for
11418360

.
ppo-u.5
for
7493976

.
vvi-u.5
for
100245471

.
sly-u.5
for
101245353

.


Ortholog ID: 14547
Species gma sly vvi ppo mtr ghi ghi sot nta nta
Symbol LOC100776142 LOC101245353 LOC100245471 LOC7493976 LOC11418360 LOC121214050 LOC107957989 LOC102580538 LOC107776283 LOC107820791
Function* putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta00073 Cutin, suberine and wax biosynthesis 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 3
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100776142 101245353 100245471 7493976 11418360 121214050 107957989 102580538 107776283 107820791
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