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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100777178   regulatory-associated protein of TOR 1 
 gma-r.7   100777178   regulatory-associated protein of TOR 1 
 gma-m.5   100777178   regulatory-associated protein of TOR 1 
 gma-u.5   100779159   regulatory-associated protein of TOR 1 
 mtr-u.5   11428688   regulatory-associated protein of TOR 1 
 ppo-u.5   7468077   regulatory-associated protein of TOR 1 
 ppo-u.5   7460425   regulatory-associated protein of TOR 1 
 ath-u.5   RAPTOR1   Regulatory-associated protein of TOR 1 
 ath-u.5   RAPTOR2   regulatory-associated protein of TOR 2 (RAPTOR2) 
 vvi-u.5   100256797   regulatory-associated protein of TOR 1 
 vvi-u.5   100261889   regulatory-associated protein of TOR 1 
 sly-u.5   101266988   regulatory-associated protein of TOR 1 
 sly-u.5   101246173   regulatory-associated protein of TOR 1 
 osa-u.5   9266997   regulatory-associated protein of TOR 1-like 
 osa-u.5   4351289   regulatory-associated protein of TOR 1-like 
 zma-u.5   103640651   regulatory-associated protein of TOR 1 
 zma-u.5   100193091   uncharacterized LOC100193091 
 zma-u.5   100275011   uncharacterized LOC100275011 

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Top 50 coexpressed genes to 100777178 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100777178 (gma-u.5 coexpression data)

CoexMap"100777178"


gmaLOC100777178 | Entrez gene ID : 100777178      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 2 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx04136 [list] [network] Autophagy - other (68 genes)
GO BP
GO:0030307 [list] [network] positive regulation of cell growth  (2 genes)  IEA  
GO:0071230 [list] [network] cellular response to amino acid stimulus  (2 genes)  IEA  
GO:0071902 [list] [network] positive regulation of protein serine/threonine kinase activity  (2 genes)  IEA  
GO:0031929 [list] [network] TOR signaling  (8 genes)  IEA  
GO:0010506 [list] [network] regulation of autophagy  (18 genes)  IEA  
GO:0009267 [list] [network] cellular response to starvation  (58 genes)  IEA  
GO CC
GO:0031931 [list] [network] TORC1 complex  (6 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0030674 [list] [network] protein-macromolecule adaptor activity  (357 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003533671.1 [sequence] [blastp]
XP_025979669.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_003533671.1)
chlo 6,  vacu 1,  nucl 1,  mito 1,  E.R. 1  (predict for XP_025979669.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_003533671.1)
chlo 4  (predict for XP_025979669.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100777178

.
gma-r.7
for
100777178

.
gma-m.5
for
100777178

.
gma-u.5
for
100779159

.
mtr-u.5
for
11428688

.
ppo-u.5
for
7468077

.
ppo-u.5
for
7460425

.
ath-u.5
for
RAPTOR1

.
ath-u.5
for
RAPTOR2

.
vvi-u.5
for
100256797

.
vvi-u.5
for
100261889

.
sly-u.5
for
101266988

.
sly-u.5
for
101246173

.
osa-u.5
for
9266997

.
osa-u.5
for
4351289

.
zma-u.5
for
103640651

.
zma-u.5
for
100193091

.
zma-u.5
for
100275011

.


Ortholog ID: 4540
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi nta nta
Symbol RAPTOR1 RAPTOR2 LOC100779159 LOC100777178 LOC101266988 LOC101246173 LOC9266997 LOC4351289 LOC100275011 LOC100193091 LOC103870584 LOC103859328 LOC100261889 LOC100256797 LOC7468077 LOC7460425 LOC11428688 LOC123103186 LOC123111378 LOC123395670 LOC107903529 LOC107896885 LOC106400787 LOC111213360 CHLRE_08g371957v5 LOC8079987 LOC8070335 LOC102586700 LOC107057742 LOC102614941 LOC100844309 LOC107796557 LOC107770804
Function* Regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 2 (RAPTOR2) regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 1-like regulatory-associated protein of TOR 1-like uncharacterized LOC100275011 uncharacterized LOC100193091 regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 1-like uncharacterized protein regulatory-associated protein of TOR 2 regulatory-associated protein of TOR 2 regulatory-associated protein of TOR 1-like regulatory-associated protein of TOR 1-like regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 2 regulatory-associated protein of TOR 1 regulatory-associated protein of TOR 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma03018 RNA degradation 3
gma04120 Ubiquitin mediated proteolysis 2
gma03015 mRNA surveillance pathway 2
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma04120 Ubiquitin mediated proteolysis 2
gma04136 Autophagy - other 2
gma03040 Spliceosome 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 5
zma04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 3
bra03083 Polycomb repressive complex 3
bra03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 3
bra03083 Polycomb repressive complex 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 5
vvi04141 Protein processing in endoplasmic reticulum 2
vvi04142 Lysosome 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo04144 Endocytosis 2
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00310 Lysine degradation 2
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae03250 Viral life cycle - HIV-1 3
tae04136 Autophagy - other 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae04136 Autophagy - other 3
tae03083 Polycomb repressive complex 2
tae03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 4
ghi04016 MAPK signaling pathway - plant 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 4
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 6
bna04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 6
bna04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03020 RNA polymerase 2
sbi03420 Nucleotide excision repair 2
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi04136 Autophagy - other 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit03013 Nucleocytoplasmic transport 2
cit03018 RNA degradation 2
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820032 831681 100779159 100777178 101266988 101246173 9266997 4351289 100275011 100193091 103870584 103859328 100261889 100256797 7468077 7460425 11428688 123103186 123111378 123395670 107903529 107896885 106400787 111213360 5720416 8079987 8070335 102586700 107057742 102614941 100844309 107796557 107770804
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