ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100777651	methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
gma-r.7	100777651	methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
gma-m.5	100777651	methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
gma-u.5	100791763	methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
mtr-u.5	11446438	methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
ppo-u.5	7457538	methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
ath-u.5	MCCB	3-methylcrotonyl-CoA carboxylase
vvi-u.5	100253805	methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
sly-u.5	101262668	methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
osa-u.5	4345605	methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
zma-u.5	100281617	uncharacterized LOC100281617

functional annotation

KEGG

gmx00280 [list] [network] Valine, leucine and isoleucine degradation (95 genes)

GO BP

GO:0006552 [list] [network] L-leucine catabolic process

(9 genes)

IEA

GO CC

GO:1905202 [list] [network] methylcrotonoyl-CoA carboxylase complex	(2 genes)	IEA
GO:0005739 [list] [network] mitochondrion	(1058 genes)	IEA

GO MF

GO:0004485 [list] [network] methylcrotonoyl-CoA carboxylase activity

(5 genes)

IEA

Protein

XP_003529401.1 [sequence] [blastp]
XP_014633640.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 8, chlo_mito 5, chlo 1	(predict for XP_003529401.1)
mito 8, chlo_mito 5, chlo 1	(predict for XP_014633640.1)

Subcellular
localization
TargetP

mito 9	(predict for XP_003529401.1)
mito 9	(predict for XP_014633640.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100777651	gma-r.7 for 100777651	gma-m.5 for 100777651	gma-u.5 for 100791763	mtr-u.5 for 11446438	ppo-u.5 for 7457538	ath-u.5 for MCCB	vvi-u.5 for 100253805	sly-u.5 for 101262668	osa-u.5 for 4345605	zma-u.5 for 100281617

Ortholog ID: 8575

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

MCCB

Function^*

methylcrotonoyl-CoA carboxylase beta chain, mitochondrial

3-methylcrotonyl-CoA carboxylase

methylcrotonoyl-CoA carboxylase beta chain, mitochondrial

methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like

methylcrotonoyl-CoA carboxylase beta chain, mitochondrial

uncharacterized LOC100281617

methylcrotonoyl-CoA carboxylase beta chain, mitochondrial

3-methylcrotonyl-CoA carboxylase

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00280	Valine, leucine and isoleucine degradation	7
gma00640	Propanoate metabolism	2
gma00785	Lipoic acid metabolism	2
gma01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00280	Valine, leucine and isoleucine degradation	7
gma00640	Propanoate metabolism	3
gma00785	Lipoic acid metabolism	2
gma01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00280	Valine, leucine and isoleucine degradation	5
mtr00350	Tyrosine metabolism	4
mtr00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
mtr00360	Phenylalanine metabolism	3
mtr01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00280	Valine, leucine and isoleucine degradation	4
ppo00520	Amino sugar and nucleotide sugar metabolism	4
ppo01250	Biosynthesis of nucleotide sugars	4
ppo01200	Carbon metabolism	3
ppo00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00280	Valine, leucine and isoleucine degradation	9
ath00640	Propanoate metabolism	5
ath00410	beta-Alanine metabolism	3
ath00785	Lipoic acid metabolism	3
ath01210	2-Oxocarboxylic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00280	Valine, leucine and isoleucine degradation	7
bra01200	Carbon metabolism	5
bra00640	Propanoate metabolism	4
bra00410	beta-Alanine metabolism	4
bra01210	2-Oxocarboxylic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00280	Valine, leucine and isoleucine degradation	6
bra01200	Carbon metabolism	5
bra01210	2-Oxocarboxylic acid metabolism	4
bra00640	Propanoate metabolism	3
bra00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00280	Valine, leucine and isoleucine degradation	4
vvi00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01200	Carbon metabolism	7
ghi00280	Valine, leucine and isoleucine degradation	7
ghi00380	Tryptophan metabolism	6
ghi00630	Glyoxylate and dicarboxylate metabolism	5
ghi04146	Peroxisome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01200	Carbon metabolism	7
ghi00280	Valine, leucine and isoleucine degradation	7
ghi00380	Tryptophan metabolism	6
ghi00630	Glyoxylate and dicarboxylate metabolism	5
ghi04146	Peroxisome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00280	Valine, leucine and isoleucine degradation	8
bna00640	Propanoate metabolism	2
bna00785	Lipoic acid metabolism	2
bna01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00280	Valine, leucine and isoleucine degradation	10
bna00640	Propanoate metabolism	4
bna00785	Lipoic acid metabolism	4
bna01210	2-Oxocarboxylic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00280	Valine, leucine and isoleucine degradation	3
cit03010	Ribosome	2
cit00650	Butanoate metabolism	2
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00052	Galactose metabolism	3
sly00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00280	Valine, leucine and isoleucine degradation	7
sot00310	Lysine degradation	3
sot01210	2-Oxocarboxylic acid metabolism	3
sot00500	Starch and sucrose metabolism	2
sot00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00280	Valine, leucine and isoleucine degradation	6
nta00310	Lysine degradation	4
nta00052	Galactose metabolism	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00280	Valine, leucine and isoleucine degradation	8
nta00052	Galactose metabolism	4
nta00260	Glycine, serine and threonine metabolism	4
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00280	Valine, leucine and isoleucine degradation	9
osa00640	Propanoate metabolism	5
osa01200	Carbon metabolism	3
osa00410	beta-Alanine metabolism	3
osa00785	Lipoic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00280	Valine, leucine and isoleucine degradation	10
zma01210	2-Oxocarboxylic acid metabolism	5
zma00640	Propanoate metabolism	3
zma01200	Carbon metabolism	3
zma00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00280	Valine, leucine and isoleucine degradation	13
tae00640	Propanoate metabolism	3
tae00785	Lipoic acid metabolism	3
tae01210	2-Oxocarboxylic acid metabolism	3
tae00230	Purine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00280	Valine, leucine and isoleucine degradation	13
tae00640	Propanoate metabolism	3
tae00785	Lipoic acid metabolism	3
tae01210	2-Oxocarboxylic acid metabolism	3
tae00230	Purine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00280	Valine, leucine and isoleucine degradation	11
hvu00640	Propanoate metabolism	5
hvu01210	2-Oxocarboxylic acid metabolism	4
hvu00071	Fatty acid degradation	3
hvu00410	beta-Alanine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00280	Valine, leucine and isoleucine degradation	7
bdi00640	Propanoate metabolism	4
bdi01200	Carbon metabolism	4
bdi00330	Arginine and proline metabolism	3
bdi00310	Lysine degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00280	Valine, leucine and isoleucine degradation	3
cre00350	Tyrosine metabolism	3
cre00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
cre00360	Phenylalanine metabolism	2
cre01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

100777651

100791763

11446438

7457538

829549

103862316

103834444

100253805

107938005

107953393

106436706

106441143

102619146

101262668

102589983

107782183

107776091

4345605

100281617

123164970

123148371

123408126

8075626

100826561

5728448

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100777651 (gma-u.5 coexpression data)

Top 50 enrichment test to 100777651 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	1	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100777651 (gma-u.5 coexpression data)

Top 50 enrichment test to 100777651 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**