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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100777679   hydroxymethylglutaryl-CoA synthase-like protein 
 gma-r.7   100777679   hydroxymethylglutaryl-CoA synthase-like protein 
 gma-m.5   100777679   hydroxymethylglutaryl-CoA synthase-like protein 
 gma-u.5   100780554   hydroxymethylglutaryl-CoA synthase 
 gma-u.5   100782595   putative hydroxymethylglutaryl-CoA synthase 
 gma-u.5   100788028   hydroxymethylglutaryl-CoA synthase 
 mtr-u.5   11429131   hydroxymethylglutaryl-CoA synthase 
 mtr-u.5   11438999   hydroxymethylglutaryl-CoA synthase 
 ppo-u.5   7479248   hydroxymethylglutaryl-CoA synthase 
 ppo-u.5   7478083   hydroxymethylglutaryl-CoA synthase 
 ath-u.5   HMGS   hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase 
 bra-r.6   103828819   hydroxymethylglutaryl-CoA synthase 
 bra-r.6   103853500   hydroxymethylglutaryl-CoA synthase 
 vvi-u.5   104882418   hydroxymethylglutaryl-CoA synthase 
 vvi-u.5   100257525   hydroxymethylglutaryl-CoA synthase 
 vvi-u.5   100244379   hydroxymethylglutaryl-CoA synthase 
 ghi-r.1   107929285   hydroxymethylglutaryl-CoA synthase 
 ghi-r.1   107963679   hydroxymethylglutaryl-CoA synthase 
 ghi-r.1   107929989   hydroxymethylglutaryl-CoA synthase 
 bna-r.1   125586914   hydroxymethylglutaryl-CoA synthase 
 bna-r.1   106396919   hydroxymethylglutaryl-CoA synthase 
 bna-r.1   106367015   hydroxymethylglutaryl-CoA synthase-like 
 cit-r.1   102629096   hydroxymethylglutaryl-CoA synthase 
 cit-r.1   102610839   hydroxymethylglutaryl-CoA synthase 
 sly-u.5   HMGS4   hydroxymethylglutaryl-CoA synthase 4 
 sly-u.5   HMGS1   hydroxymethylglutaryl-CoA synthase 1 
 sly-u.5   HMGS2   3-hydroxy-3-methylglutaryl coenzyme A synthase 
 sot-r.1   102597613   hydroxymethylglutaryl-CoA synthase-like 
 sot-r.1   102584775   hydroxymethylglutaryl-CoA synthase-like 
 sot-r.1   102601874   hydroxymethylglutaryl-CoA synthase-like 
 nta-r.1   107777352   hydroxymethylglutaryl-CoA synthase 
 nta-r.1   107816507   hydroxymethylglutaryl-CoA synthase 
 nta-r.1   107805038   hydroxymethylglutaryl-CoA synthase 
 osa-u.5   4347614   hydroxymethylglutaryl-CoA synthase 
 osa-u.5   4346215   hydroxymethylglutaryl-CoA synthase 
 osa-u.5   4331418   hydroxymethylglutaryl-CoA synthase 
 zma-u.5   103647599   hydroxymethylglutaryl-CoA synthase 
 zma-u.5   100384769   putative hydroxymethylglutaryl-CoA synthase family protein 
 zma-u.5   100285783   hydroxymethylglutaryl-CoA synthase 
 tae-r.2   123099042   hydroxymethylglutaryl-CoA synthase 
 tae-r.2   123152308   hydroxymethylglutaryl-CoA synthase 
 tae-r.2   123093812   uncharacterized LOC123093812 
 hvu-r.1   123407244   hydroxymethylglutaryl-CoA synthase 
 hvu-r.1   123449907   hydroxymethylglutaryl-CoA synthase-like 
 sbi-r.1   8057865   hydroxymethylglutaryl-CoA synthase 
 sbi-r.1   110433071   hydroxymethylglutaryl-CoA synthase-like 
 bdi-r.1   100846544   hydroxymethylglutaryl-CoA synthase 
 bdi-r.1   100833811   hydroxymethylglutaryl-CoA synthase 
 cre-r.1   CHLRE_16g678850v5   uncharacterized protein 

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Top 50 coexpressed genes to 100777679 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100777679 (gma-u.5 coexpression data)

CoexMap"100777679"


gmaLOC100777679 | Entrez gene ID : 100777679      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 6 2 2 1 2 3 3 3 2 3 3 3 3 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00280 [list] [network] Valine, leucine and isoleucine degradation (95 genes)
gmx00650 [list] [network] Butanoate metabolism (42 genes)
gmx00900 [list] [network] Terpenoid backbone biosynthesis (91 genes)
GO BP
GO:0010142 [list] [network] farnesyl diphosphate biosynthetic process, mevalonate pathway  (7 genes)  IEA  
GO:0006084 [list] [network] acetyl-CoA metabolic process  (49 genes)  IEA  
GO CC
GO MF
GO:0004421 [list] [network] hydroxymethylglutaryl-CoA synthase activity  (5 genes)  IEA  
Protein NP_001242721.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_001242721.2)
Subcellular
localization
TargetP
other 6,  scret 3  (predict for NP_001242721.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100777679
gma-r.7
for
100777679
gma-m.5
for
100777679
gma-u.5
for
100780554
gma-u.5
for
100782595
gma-u.5
for
100788028
mtr-u.5
for
11429131
mtr-u.5
for
11438999
ppo-u.5
for
7479248
ppo-u.5
for
7478083
ath-u.5
for
HMGS
bra-r.6
for
103828819
bra-r.6
for
103853500
vvi-u.5
for
104882418
vvi-u.5
for
100257525
vvi-u.5
for
100244379
ghi-r.1
for
107929285
ghi-r.1
for
107963679
ghi-r.1
for
107929989
bna-r.1
for
125586914
bna-r.1
for
106396919
bna-r.1
for
106367015
cit-r.1
for
102629096
cit-r.1
for
102610839
sly-u.5
for
HMGS4
sly-u.5
for
HMGS1
sly-u.5
for
HMGS2
sot-r.1
for
102597613
sot-r.1
for
102584775
sot-r.1
for
102601874
nta-r.1
for
107777352
nta-r.1
for
107816507
nta-r.1
for
107805038
osa-u.5
for
4347614
osa-u.5
for
4346215
osa-u.5
for
4331418
zma-u.5
for
103647599
zma-u.5
for
100384769
zma-u.5
for
100285783
tae-r.2
for
123099042
tae-r.2
for
123152308
tae-r.2
for
123093812
hvu-r.1
for
123407244
hvu-r.1
for
123449907
sbi-r.1
for
8057865
sbi-r.1
for
110433071
bdi-r.1
for
100846544
bdi-r.1
for
100833811
cre-r.1
for
CHLRE_16g678850v5


Ortholog ID: 2351
Species gma gma gma mtr mtr ppo ppo ath bra bra vvi vvi ghi ghi ghi bna bna bna cit cit sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC100780554 LOC100782595 LOC100794889 LOC11429131 LOC11438999 LOC7479248 LOC7478083 HMGS LOC103828819 LOC103853500 LOC104882418 LOC100244379 LOC107963679 LOC107929989 LOC107926921 LOC106367015 LOC106380573 LOC106418704 LOC102629096 LOC102610839 HMGS4 HMGS1 HMGS2 LOC102597613 LOC102584775 LOC102601874 LOC107777352 LOC107816507 LOC107798568 LOC4347614 LOC4346215 LOC4331418 LOC103647599 LOC100384769 LOC100285783 LOC123099042 LOC123093812 LOC123165539 LOC123407244 LOC123449907 LOC8057865 LOC110433071 LOC100846544 LOC100833811 CHLRE_16g678850v5
Function* hydroxymethylglutaryl-CoA synthase putative hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase-like hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase 4 hydroxymethylglutaryl-CoA synthase 1 3-hydroxy-3-methylglutaryl coenzyme A synthase hydroxymethylglutaryl-CoA synthase-like hydroxymethylglutaryl-CoA synthase-like hydroxymethylglutaryl-CoA synthase-like hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase putative hydroxymethylglutaryl-CoA synthase family protein hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase uncharacterized LOC123093812 hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase-like hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase-like hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA synthase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 4
gma00020 Citrate cycle (TCA cycle) 3
gma00270 Cysteine and methionine metabolism 3
gma00566 Sulfoquinovose metabolism 2
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 5
gma00280 Valine, leucine and isoleucine degradation 3
gma00999 Biosynthesis of various plant secondary metabolites 3
gma00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 2
gma00650 Butanoate metabolism 2
gma00900 Terpenoid backbone biosynthesis 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 7
mtr00280 Valine, leucine and isoleucine degradation 3
mtr00650 Butanoate metabolism 3
mtr00909 Sesquiterpenoid and triterpenoid biosynthesis 2
mtr00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 7
mtr00280 Valine, leucine and isoleucine degradation 3
mtr00650 Butanoate metabolism 3
mtr00941 Flavonoid biosynthesis 2
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 6
ppo01200 Carbon metabolism 6
ppo00900 Terpenoid backbone biosynthesis 4
ppo00010 Glycolysis / Gluconeogenesis 4
ppo00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 9
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
ppo00670 One carbon pool by folate 3
ppo00270 Cysteine and methionine metabolism 3
ppo00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 8
ath01200 Carbon metabolism 8
ath00620 Pyruvate metabolism 6
ath00900 Terpenoid backbone biosynthesis 4
ath00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 9
bra01200 Carbon metabolism 9
bra00061 Fatty acid biosynthesis 8
bra01212 Fatty acid metabolism 8
bra00640 Propanoate metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 5
bra04145 Phagosome 4
bra04517 IgSF CAM signaling 4
bra00061 Fatty acid biosynthesis 3
bra01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi00280 Valine, leucine and isoleucine degradation 2
vvi00900 Terpenoid backbone biosynthesis 2
vvi00310 Lysine degradation 2
vvi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00280 Valine, leucine and isoleucine degradation 2
vvi00900 Terpenoid backbone biosynthesis 2
vvi00310 Lysine degradation 2
vvi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 6
ghi00650 Butanoate metabolism 6
ghi00900 Terpenoid backbone biosynthesis 6
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 7
ghi00650 Butanoate metabolism 7
ghi00900 Terpenoid backbone biosynthesis 7
ghi00330 Arginine and proline metabolism 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 6
ghi00650 Butanoate metabolism 6
ghi00900 Terpenoid backbone biosynthesis 6
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 7
bna00280 Valine, leucine and isoleucine degradation 5
bna00650 Butanoate metabolism 5
bna00040 Pentose and glucuronate interconversions 2
bna00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 7
bna00280 Valine, leucine and isoleucine degradation 5
bna00650 Butanoate metabolism 5
bna00040 Pentose and glucuronate interconversions 2
bna00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 7
bna00280 Valine, leucine and isoleucine degradation 5
bna00650 Butanoate metabolism 5
bna00040 Pentose and glucuronate interconversions 2
bna00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 5
sly00900 Terpenoid backbone biosynthesis 4
sly00280 Valine, leucine and isoleucine degradation 3
sly00650 Butanoate metabolism 3
sly00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 6
sly00900 Terpenoid backbone biosynthesis 4
sly00280 Valine, leucine and isoleucine degradation 3
sly00650 Butanoate metabolism 3
sly00908 Zeatin biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 7
sly04016 MAPK signaling pathway - plant 4
sly04075 Plant hormone signal transduction 4
sly00020 Citrate cycle (TCA cycle) 3
sly00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 6
sot00280 Valine, leucine and isoleucine degradation 3
sot00650 Butanoate metabolism 3
sot00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 10
sot00280 Valine, leucine and isoleucine degradation 5
sot00650 Butanoate metabolism 5
sot01200 Carbon metabolism 4
sot00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 8
sot00280 Valine, leucine and isoleucine degradation 4
sot00650 Butanoate metabolism 4
sot00020 Citrate cycle (TCA cycle) 3
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 4
nta00650 Butanoate metabolism 4
nta00900 Terpenoid backbone biosynthesis 4
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 4
nta00650 Butanoate metabolism 4
nta00900 Terpenoid backbone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 4
nta00650 Butanoate metabolism 4
nta00900 Terpenoid backbone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00061 Fatty acid biosynthesis 2
osa01212 Fatty acid metabolism 2
osa00260 Glycine, serine and threonine metabolism 2
osa00010 Glycolysis / Gluconeogenesis 2
osa00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00620 Pyruvate metabolism 4
osa00010 Glycolysis / Gluconeogenesis 3
osa01200 Carbon metabolism 3
osa00061 Fatty acid biosynthesis 2
osa00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma01250 Biosynthesis of nucleotide sugars 2
zma00280 Valine, leucine and isoleucine degradation 2
zma00650 Butanoate metabolism 2
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01212 Fatty acid metabolism 9
zma01200 Carbon metabolism 6
zma00061 Fatty acid biosynthesis 6
zma01240 Biosynthesis of cofactors 6
zma00620 Pyruvate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01212 Fatty acid metabolism 6
zma00900 Terpenoid backbone biosynthesis 4
zma00061 Fatty acid biosynthesis 4
zma00280 Valine, leucine and isoleucine degradation 2
zma00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae00020 Citrate cycle (TCA cycle) 3
tae00620 Pyruvate metabolism 3
tae00785 Lipoic acid metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00061 Fatty acid biosynthesis 7
tae01212 Fatty acid metabolism 7
tae01240 Biosynthesis of cofactors 6
tae00010 Glycolysis / Gluconeogenesis 5
tae00620 Pyruvate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 4
tae00020 Citrate cycle (TCA cycle) 3
tae00480 Glutathione metabolism 3
tae01200 Carbon metabolism 3
tae01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00280 Valine, leucine and isoleucine degradation 4
sbi00410 beta-Alanine metabolism 3
sbi00640 Propanoate metabolism 3
sbi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100780554 100782595 100794889 11429131 11438999 7479248 7478083 826788 103828819 103853500 104882418 100244379 107963679 107929989 107926921 106367015 106380573 106418704 102629096 102610839 101260619 101249394 100134904 102597613 102584775 102601874 107777352 107816507 107798568 4347614 4346215 4331418 103647599 100384769 100285783 123099042 123093812 123165539 123407244 123449907 8057865 110433071 100846544 100833811 5721528
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