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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100777977   TATA-binding protein-associated factor BTAF1 
 gma-r.7   100777977   TATA-binding protein-associated factor BTAF1 
 gma-u.5   100784852   TATA-binding protein-associated factor BTAF1 
 mtr-u.5   11423253   TATA-binding protein-associated factor BTAF1 
 ppo-u.5   7493853   TATA-binding protein-associated factor BTAF1 
 ath-u.5   RGD3   ROOT GROWTH DEFECTIVE 3 
 vvi-u.5   100247209   TATA-binding protein-associated factor BTAF1 
 sly-u.5   101244404   TATA-binding protein-associated factor BTAF1 
 osa-u.5   4328386   TATA-binding protein-associated factor BTAF1 
 zma-u.5   103630794   TATA-binding protein-associated factor BTAF1 

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Top 50 coexpressed genes to 100777977 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100777977 (gma-u.5 coexpression data)

CoexMap"100777977"


gmaLOC100777977 | Entrez gene ID : 100777977      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0017025 [list] [network] TBP-class protein binding  (21 genes)  IEA  
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (67 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (756 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3753 genes)  IEA  
Protein XP_003540105.1 [sequence] [blastp]
XP_006591944.1 [sequence] [blastp]
XP_006591945.1 [sequence] [blastp]
XP_040863214.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 2,  mito 1,  cyto_nucl 1,  cyto_mito 1,  cysk_nucl 1  (predict for XP_003540105.1)
chlo 5,  nucl 2,  mito 1,  cyto_nucl 1,  cyto_mito 1,  cysk_nucl 1  (predict for XP_006591944.1)
chlo 5,  nucl 2,  mito 1,  cyto_nucl 1,  cyto_mito 1,  cysk_nucl 1  (predict for XP_006591945.1)
chlo 5,  nucl 2,  mito 1,  cyto_nucl 1,  cyto_mito 1,  cysk_nucl 1  (predict for XP_040863214.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_003540105.1)
mito 8  (predict for XP_006591944.1)
mito 8  (predict for XP_006591945.1)
mito 8  (predict for XP_040863214.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100777977

.
gma-r.7
for
100777977

.
gma-u.5
for
100784852

.
mtr-u.5
for
11423253

.
ppo-u.5
for
7493853

.
ath-u.5
for
RGD3

.
vvi-u.5
for
100247209

.
sly-u.5
for
101244404

.
osa-u.5
for
4328386

.
zma-u.5
for
103630794

.


Ortholog ID: 8982
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol RGD3 LOC100784852 LOC100777977 LOC101244404 LOC4328386 LOC103630794 LOC103841344 LOC100247209 LOC7493853 LOC11423253 LOC123071000 LOC123149857 LOC123452704 LOC107937609 LOC107893121 LOC106414992 LOC106414845 CHLRE_16g687301v5 LOC8065326 LOC102591585 LOC102626322 LOC100845278 LOC107827845 LOC142181054
Function* ROOT GROWTH DEFECTIVE 3 TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1 uncharacterized protein TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1 TATA-binding protein-associated factor BTAF1-like TATA-binding protein-associated factor BTAF1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03018 RNA degradation 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma00562 Inositol phosphate metabolism 2
zma04070 Phosphatidylinositol signaling system 2
zma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 4
ghi03250 Viral life cycle - HIV-1 4
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03083 Polycomb repressive complex 4
ghi03250 Viral life cycle - HIV-1 4
ghi04120 Ubiquitin mediated proteolysis 4
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04145 Phagosome 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04145 Phagosome 2
nta03060 Protein export 2
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824595 100784852 100777977 101244404 4328386 103630794 103841344 100247209 7493853 11423253 123071000 123149857 123452704 107937609 107893121 106414992 106414845 5717661 8065326 102591585 102626322 100845278 107827845 142181054
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