Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100778409   DNA repair protein REV1 
 gma-r.7   100778409   DNA repair protein REV1 
 gma-m.5   100778409   DNA repair protein REV1 
 mtr-u.5   25494478   DNA repair protein REV1 
 ppo-u.5   7490072   DNA repair protein REV1 
 ath-u.5   REV1   DNA-directed DNA polymerase 
 vvi-u.5   100247553   DNA repair protein REV1 
 sly-u.5   101257318   DNA repair protein REV1 
 osa-u.5   4341904   DNA repair protein REV1 
 zma-u.5   103626355   DNA repair protein REV1 

close


Top 50 coexpressed genes to 100778409 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100778409 (gma-u.5 coexpression data)

CoexMap"100778409"


gmaLOC100778409 | Entrez gene ID : 100778409      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03460 [list] [network] Fanconi anemia pathway (49 genes)
GO BP
GO:0070987 [list] [network] error-free translesion synthesis  (1 genes)  IEA  
GO:0042276 [list] [network] error-prone translesion synthesis  (6 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0017125 [list] [network] deoxycytidyl transferase activity  (1 genes)  IEA  
GO:0003887 [list] [network] DNA-directed DNA polymerase activity  (30 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (116 genes)  IEA  
Protein XP_003516774.1 [sequence] [blastp]
XP_006573904.1 [sequence] [blastp]
XP_006573905.1 [sequence] [blastp]
XP_040873579.1 [sequence] [blastp]
XP_040873581.1 [sequence] [blastp]
XP_040873582.1 [sequence] [blastp]
XP_040873588.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  chlo_mito 2,  cysk_nucl 1  (predict for XP_003516774.1)
chlo 4,  nucl 2,  chlo_mito 2,  cysk_nucl 1  (predict for XP_006573904.1)
chlo 4,  nucl 2,  chlo_mito 2,  cysk_nucl 1  (predict for XP_006573905.1)
chlo 4,  nucl 2,  chlo_mito 2,  cysk_nucl 1  (predict for XP_040873579.1)
chlo 4,  nucl 2,  chlo_mito 2,  cysk_nucl 1  (predict for XP_040873581.1)
chlo 4,  nucl 2,  chlo_mito 2,  cysk_nucl 1  (predict for XP_040873582.1)
chlo 4,  nucl 2,  cysk_nucl 1,  E.R. 1,  mito 1,  vacu 1,  golg 1,  E.R._plas 1,  cyto_E.R. 1  (predict for XP_040873588.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_003516774.1)
chlo 7  (predict for XP_006573904.1)
chlo 7  (predict for XP_006573905.1)
chlo 7  (predict for XP_040873579.1)
chlo 7  (predict for XP_040873581.1)
chlo 7  (predict for XP_040873582.1)
chlo 7  (predict for XP_040873588.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100778409

.
gma-r.7
for
100778409

.
gma-m.5
for
100778409

.
mtr-u.5
for
25494478

.
ppo-u.5
for
7490072

.
ath-u.5
for
REV1

.
vvi-u.5
for
100247553

.
sly-u.5
for
101257318

.
osa-u.5
for
4341904

.
zma-u.5
for
103626355

.


Ortholog ID: 10979
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol REV1 LOC100778409 LOC101257318 LOC4341904 LOC103626355 LOC103827830 LOC100247553 LOC7490072 LOC25494478 LOC123148830 LOC123165771 LOC123409889 LOC107920717 LOC107894697 LOC106391142 LOC106386355 CHLRE_12g550800v5 LOC8063788 LOC102599689 LOC102626428 LOC100831516 LOC107827331 LOC107788193
Function* DNA-directed DNA polymerase DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 uncharacterized protein DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03430 Mismatch repair 4
bra03460 Fanconi anemia pathway 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00270 Cysteine and methionine metabolism 2
vvi00920 Sulfur metabolism 2
vvi01200 Carbon metabolism 2
vvi01230 Biosynthesis of amino acids 2
vvi01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 7
tae03440 Homologous recombination 7
tae03460 Fanconi anemia pathway 6
tae03030 DNA replication 4
tae03410 Base excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 7
tae03030 DNA replication 5
tae03410 Base excision repair 4
tae03420 Nucleotide excision repair 4
tae03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 6
ghi01040 Biosynthesis of unsaturated fatty acids 6
ghi01212 Fatty acid metabolism 6
ghi03460 Fanconi anemia pathway 4
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 6
ghi03250 Viral life cycle - HIV-1 6
ghi03460 Fanconi anemia pathway 4
ghi03430 Mismatch repair 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834504 100778409 101257318 4341904 103626355 103827830 100247553 7490072 25494478 123148830 123165771 123409889 107920717 107894697 106391142 106386355 5719658 8063788 102599689 102626428 100831516 107827331 107788193
The preparation time of this page was 0.1 [sec].