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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100782325   pentatricopeptide repeat-containing protein At4g21065 
 mtr-u.5   25483803   pentatricopeptide repeat-containing protein At2g03880, mitochondrial 
 mtr-u.5   11423288   putative pentatricopeptide repeat-containing protein At3g23330 
 vvi-u.5   100241261   pentatricopeptide repeat-containing protein At2g01510, mitochondrial 
 sly-u.5   101268748   pentatricopeptide repeat-containing protein CRR2, chloroplastic-like 
 sly-u.5   101258097   pentatricopeptide repeat-containing protein At4g21065 
 zma-u.5   103633575   pentatricopeptide repeat-containing protein At4g21065 

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Top 50 coexpressed genes to 100782325 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100782325 (gma-u.5 coexpression data)

CoexMap"100779141"


gmaLOC100779141 | Entrez gene ID : 100779141      
Species gma mtr vvi sly zma sbi nta bra osa cre cit hvu ppo bdi sot tae ath bna ghi
Paralog 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_006575303.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9  (predict for XP_006575303.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for XP_006575303.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100782325

.
mtr-u.5
for
25483803

.
mtr-u.5
for
11423288

.
vvi-u.5
for
100241261

.
sly-u.5
for
101268748

.
sly-u.5
for
101258097

.
zma-u.5
for
103633575

.


Ortholog ID: 7887
Species gma sly sly zma bra vvi mtr mtr hvu ghi bna bna sot sot cit bdi nta nta
Symbol LOC100782325 LOC101268748 LOC101258097 LOC103633575 LOC103868369 LOC104880153 LOC25483803 LOC11423288 LOC123408875 LOC107925550 LOC106412071 LOC125608542 LOC107059474 LOC102603237 LOC102617710 LOC112269268 LOC107795475 LOC107774015
Function* pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein CRR2, chloroplastic-like pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At2g33760-like pentatricopeptide repeat-containing protein At2g33760 pentatricopeptide repeat-containing protein At2g03880, mitochondrial putative pentatricopeptide repeat-containing protein At3g23330 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At2g33760 pentatricopeptide repeat-containing protein At2g33760 pentatricopeptide repeat-containing protein At2g33760-like pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein CRR2, chloroplastic-like putative pentatricopeptide repeat-containing protein At5g52630
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100782325 101268748 101258097 103633575 103868369 104880153 25483803 11423288 123408875 107925550 106412071 125608542 107059474 102603237 102617710 112269268 107795475 107774015
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