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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100779490   chloride conductance regulatory protein ICln 
 gma-r.7   100779490   chloride conductance regulatory protein ICln 
 gma-u.5   100790816   chloride conductance regulatory protein ICln 
 mtr-u.5   11433399   chloride conductance regulatory protein ICln 
 ppo-u.5   7481827   chloride conductance regulatory protein ICln 
 ppo-u.5   7482145   chloride conductance regulatory protein ICln 
 ath-u.5   AT5G62290   nucleotide-sensitive chloride conductance regulator (ICln) family protein 
 vvi-u.5   100248089   chloride conductance regulatory protein ICln 
 sly-u.5   101250971   chloride conductance regulatory protein ICln 
 osa-u.5   4332256   chloride conductance regulatory protein ICln 
 osa-u.5   4348184   chloride conductance regulatory protein ICln 
 osa-u.5   107279226   chloride conductance regulatory protein ICln-like 
 zma-u.5   100273863   uncharacterized LOC100273863 
 zma-u.5   100192551   uncharacterized LOC100192551 

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Top 50 coexpressed genes to 100779490 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100779490 (gma-u.5 coexpression data)

CoexMap"100779490"


gmaLOC100779490 | Entrez gene ID : 100779490      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 1 1 1 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006884 [list] [network] cell volume homeostasis  (4 genes)  IEA  
GO:0006821 [list] [network] chloride transport  (20 genes)  IEA  
GO:0045292 [list] [network] mRNA cis splicing, via spliceosome  (35 genes)  IEA  
GO:0000387 [list] [network] spliceosomal snRNP assembly  (40 genes)  IEA  
GO CC
GO:0034709 [list] [network] methylosome  (2 genes)  IEA  
GO:0034715 [list] [network] pICln-Sm protein complex  (17 genes)  IEA  
GO:0005681 [list] [network] spliceosomal complex  (245 genes)  IEA  
GO:0005829 [list] [network] cytosol  (1702 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (1870 genes)  IEA  
GO MF
Protein XP_003534420.1 [sequence] [blastp]
XP_006587720.1 [sequence] [blastp]
XP_006587721.1 [sequence] [blastp]
XP_040861065.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4  (predict for XP_003534420.1)
nucl 5,  cyto 4  (predict for XP_006587720.1)
nucl 5,  cyto 4  (predict for XP_006587721.1)
nucl 5,  cyto 4  (predict for XP_040861065.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003534420.1)
other 8  (predict for XP_006587720.1)
other 8  (predict for XP_006587721.1)
other 8  (predict for XP_040861065.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100779490

.
gma-r.7
for
100779490

.
gma-u.5
for
100790816

.
mtr-u.5
for
11433399

.
ppo-u.5
for
7481827

.
ppo-u.5
for
7482145

.
ath-u.5
for
AT5G62290

.
vvi-u.5
for
100248089

.
sly-u.5
for
101250971

.
osa-u.5
for
4332256

.
osa-u.5
for
4348184

.
osa-u.5
for
107279226

.
zma-u.5
for
100273863

.
zma-u.5
for
100192551

.


Ortholog ID: 6390
Species ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta nta
Symbol AT5G62290 LOC100790816 LOC100779490 LOC101250971 LOC4348184 LOC107279226 LOC100192551 LOC100273863 LOC103874665 LOC103854998 LOC100248089 LOC7482145 LOC7481827 LOC11433399 LOC123092762 LOC123098056 LOC123449151 LOC107937643 LOC107955411 LOC125581612 LOC106388071 CHLRE_12g538150v5 LOC8054339 LOC102582501 LOC102619652 LOC100838940 LOC100839422 LOC107816851 LOC107776947
Function* nucleotide-sensitive chloride conductance regulator (ICln) family protein chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln-like uncharacterized LOC100192551 uncharacterized LOC100273863 chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln-like chloride conductance regulatory protein ICln uncharacterized protein chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln chloride conductance regulatory protein ICln
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath03040 Spliceosome 2
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 4
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03420 Nucleotide excision repair 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi03040 Spliceosome 4
vvi03013 Nucleocytoplasmic transport 2
vvi03015 mRNA surveillance pathway 2
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03082 ATP-dependent chromatin remodeling 3
tae03083 Polycomb repressive complex 3
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
tae03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
cre03020 RNA polymerase 2
cre03420 Nucleotide excision repair 2
cre03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 3
sbi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot03018 RNA degradation 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03010 Ribosome 2
cit03008 Ribosome biogenesis in eukaryotes 2
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi03040 Spliceosome 3
bdi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836350 100790816 100779490 101250971 4348184 107279226 100192551 100273863 103874665 103854998 100248089 7482145 7481827 11433399 123092762 123098056 123449151 107937643 107955411 125581612 106388071 5718451 8054339 102582501 102619652 100838940 100839422 107816851 107776947
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