ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100779584	valine--tRNA ligase
gma-r.7	100779584	valine--tRNA ligase
gma-u.5	100790753	uncharacterized LOC100790753
gma-u.5	100817903	uncharacterized LOC100817903
mtr-u.5	11426027	uncharacterized LOC11426027
ppo-u.5	7486559	uncharacterized LOC7486559
ppo-u.5	7467193	uncharacterized LOC7467193
ath-u.5	AT4G24590	RING finger protein
ath-u.5	AT5G49710	RING finger protein
vvi-u.5	100267834	uncharacterized LOC100267834
sly-u.5	101250398	uncharacterized LOC101250398
osa-u.5	4330928	uncharacterized LOC4330928
osa-u.5	4347310	uncharacterized LOC4347310
zma-u.5	109942654	uncharacterized LOC109942654
zma-u.5	103627822	MADS box interactor-like
zma-u.5	103634599	uncharacterized LOC103634599

Annotation

functional annotation

KEGG

gmx00520 [list] [network] Amino sugar and nucleotide sugar metabolism (233 genes)

gmx01250 [list] [network] Biosynthesis of nucleotide sugars (182 genes)

GO BP

GO:0042732 [list] [network] D-xylose metabolic process

(17 genes)

IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(9233 genes)

IEA

GO MF

GO:0048040 [list] [network] UDP-glucuronate decarboxylase activity	(16 genes)	IEA
GO:0070403 [list] [network] NAD+ binding	(30 genes)	IEA

Protein

XP_025980411.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 2, mito 2, nucl 1, plas 1, vacu 1, golg 1, nucl_plas 1, golg_plas 1

(predict for XP_025980411.1)

Subcellular
localization
TargetP

mito 4

(predict for XP_025980411.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100779584 .	gma-r.7 for 100779584 .	gma-u.5 for 100790753 .	gma-u.5 for 100817903 .	mtr-u.5 for 11426027 .	ppo-u.5 for 7486559 .	ppo-u.5 for 7467193 .	ath-u.5 for AT4G24590 .	ath-u.5 for AT5G49710 .	vvi-u.5 for 100267834 .	sly-u.5 for 101250398 .	osa-u.5 for 4330928 .	osa-u.5 for 4347310 .	zma-u.5 for 109942654 .	zma-u.5 for 103627822 .	zma-u.5 for 103634599 .

Ortholog

Ortholog ID: 4271

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

Function^*

RING finger protein

valine--tRNA ligase

uncharacterized LOC100790753

uncharacterized LOC101250398

uncharacterized LOC4347310

uncharacterized LOC4330928

MADS box interactor-like

uncharacterized LOC109942654

uncharacterized LOC103862320

uncharacterized LOC100267834

uncharacterized LOC7486559

uncharacterized LOC7467193

uncharacterized LOC11426027

uncharacterized LOC123104031

uncharacterized LOC123128640

uncharacterized LOC123398934

uncharacterized LOC123402700

uncharacterized LOC107900676

uncharacterized LOC107957530

uncharacterized BNAC01G16470D

uncharacterized LOC125590099

uncharacterized protein

uncharacterized LOC8082691

uncharacterized LOC8063723

uncharacterized LOC102585183

uncharacterized LOC102627919

uncharacterized LOC100827724

uncharacterized LOC100833711

uncharacterized LOC107789233

uncharacterized LOC107792374

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2
ath04145	Phagosome	2
ath04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04136	Autophagy - other	2
ath04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3
ppo04130	SNARE interactions in vesicular transport	2
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	2
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00600	Sphingolipid metabolism	3
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	6
ghi03272	Virion - Hepatitis viruses	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	6
ghi03272	Virion - Hepatitis viruses	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	4

Expression

Expression pattern

Entrez Gene ID^*

828561

835034

100779584

100790753

101250398

4347310

4330928

103627822

109942654

103862320

100267834

7486559

7467193

11426027

123104031

123128640

123398934

123402700

107900676

107957530

106391305

125590099

5723603

8082691

8063723

102585183

102627919

100827724

100833711

107789233

107792374

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100779584 (gma-u.5 coexpression data)

Top 50 enrichment test to 100779584 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	cre	ghi	cit	hvu	bdi	sot	bra	sbi	tae	nta	bna
Paralog	4	1	2	2	1	1	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100779584 (gma-u.5 coexpression data)

Top 50 enrichment test to 100779584 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**