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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100812413   MADS-box transcription factor 23 
 gma-u.5   NMHC5   MADS-box transcription factor NMHC5 
 mtr-u.5   11407839   agamous-like MADS-box protein AGL21 
 mtr-u.5   11423803   MADS-box transcription factor 23 
 mtr-u.5   11418839   MADS-box transcription factor 23 
 ath-u.5   AGL16   AGAMOUS-like 16 
 osa-u.5   107276913   MADS-box transcription factor 23-like 
 osa-u.5   4330621   MADS-box transcription factor 57-like 
 osa-u.5   4329771   MADS-box transcription factor 27-like 
 zma-u.5   541764   MADS2 
 zma-u.5   103646360   MADS-box transcription factor 27 

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Top 50 coexpressed genes to 100812413 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100812413 (gma-u.5 coexpression data)

CoexMap"100779647"


gmaLOC100779647 | Entrez gene ID : 100779647      
Species gma mtr ath osa zma sly sbi nta bra cre vvi cit hvu ppo bdi sot tae bna ghi
Paralog 2 3 1 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (294 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (449 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (557 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (899 genes)  IEA  
Protein XP_014634039.1 [sequence] [blastp]
XP_025985235.1 [sequence] [blastp]
XP_040873919.1 [sequence] [blastp]
XP_040873920.1 [sequence] [blastp]
XP_040873921.1 [sequence] [blastp]
XP_040873922.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  mito 1,  golg_plas 1  (predict for XP_014634039.1)
nucl 8,  chlo 1,  mito 1,  chlo_mito 1,  golg_plas 1  (predict for XP_025985235.1)
nucl 9,  mito 1,  golg_plas 1  (predict for XP_040873919.1)
nucl 9,  mito 1,  golg_plas 1  (predict for XP_040873920.1)
nucl 9,  mito 1,  golg_plas 1  (predict for XP_040873921.1)
nucl 8,  chlo 1,  mito 1,  chlo_mito 1,  golg_plas 1  (predict for XP_040873922.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for XP_014634039.1)
other 6,  mito 4  (predict for XP_025985235.1)
other 6,  mito 4  (predict for XP_040873919.1)
other 6,  mito 4  (predict for XP_040873920.1)
other 6,  mito 4  (predict for XP_040873921.1)
other 6,  mito 4  (predict for XP_040873922.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100812413

.
gma-u.5
for
NMHC5

.
mtr-u.5
for
11407839

.
mtr-u.5
for
11423803

.
mtr-u.5
for
11418839

.
ath-u.5
for
AGL16

.
osa-u.5
for
107276913

.
osa-u.5
for
4330621

.
osa-u.5
for
4329771

.
zma-u.5
for
541764

.
zma-u.5
for
103646360

.


Ortholog ID: 554
Species ath gma osa zma zma bra ppo mtr mtr tae ghi bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AGL16 LOC100812413 LOC4329771 LOC541764 LOC103655506 LOC103862329 LOC7461842 LOC11423803 LOC11418839 LOC100136966 LOC121202993 LOC106436609 LOC110434910 LOC8057478 LOC102591829 LOC102582884 LOC102613302 LOC102630220 LOC100840222 LOC100823221 LOC107811079 LOC107798569
Function* AGAMOUS-like 16 MADS-box transcription factor 23 MADS-box transcription factor 27-like MADS2 MADS-box transcription factor 27 agamous-like MADS-box protein AGL16 MADS-box transcription factor 23 MADS-box transcription factor 23 MADS-box transcription factor 23 MADS-box transcription factor 27 MADS-box transcription factor 23 agamous-like MADS-box protein AGL21 MADS-box transcription factor 57-like MADS-box transcription factor 27 MADS-box transcription factor 23 MADS-box transcription factor 23-like MADS-box transcription factor 23-like MADS-box transcription factor 23-like MADS-box transcription factor 57-like MADS-box transcription factor 27 MADS-box transcription factor 23-like MADS-box transcription factor 23
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
osa04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 4
mtr04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 2
mtr00941 Flavonoid biosynthesis 2
mtr00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 8
bna00920 Sulfur metabolism 8
bna01200 Carbon metabolism 8
bna01230 Biosynthesis of amino acids 8
bna01320 Sulfur cycle 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
sot04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 4
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 8
bdi03040 Spliceosome 3
bdi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta04070 Phosphatidylinositol signaling system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824890 100812413 4329771 541764 103655506 103862329 7461842 11423803 11418839 100136966 121202993 106436609 110434910 8057478 102591829 102582884 102613302 102630220 100840222 100823221 107811079 107798569
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