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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100779864   protein SUPPRESSOR OF GENE SILENCING 3 
 gma-r.7   100779864   protein SUPPRESSOR OF GENE SILENCING 3 
 gma-m.5   100779864   protein SUPPRESSOR OF GENE SILENCING 3 
 gma-u.5   100805242   uncharacterized LOC100805242 
 mtr-u.5   25485210   uncharacterized LOC25485210 
 ppo-u.5   18101554   putative proline-rich receptor-like protein kinase PERK11 
 ppo-u.5   7474208   uncharacterized LOC7474208 
 ath-u.5   AT3G22430   RNA recognition motif XS domain protein 
 vvi-u.5   100259596   uncharacterized LOC100259596 
 sly-u.5   101252627   uncharacterized LOC101252627 
 osa-u.5   4331689   uncharacterized LOC4331689 
 zma-u.5   103644434   protein SUPPRESSOR OF GENE SILENCING 3 
 zma-u.5   100194318   XS domain containing protein expressed 

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Top 50 coexpressed genes to 100779864 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100779864 (gma-u.5 coexpression data)

CoexMap"100779864"


gmaLOC100779864 | Entrez gene ID : 100779864      
Species gma mtr ppo ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 4 1 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031047 [list] [network] regulatory ncRNA-mediated gene silencing  (94 genes)  IEA  
GO CC
GO MF
Protein XP_003535649.1 [sequence] [blastp]
XP_014618855.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  mito 2,  cyto_nucl 2,  cysk_nucl 2  (predict for XP_003535649.1)
nucl 4,  chlo 2,  mito 2,  chlo_mito 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_014618855.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003535649.1)
chlo 8  (predict for XP_014618855.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100779864

.
gma-r.7
for
100779864

.
gma-m.5
for
100779864

.
gma-u.5
for
100805242

.
mtr-u.5
for
25485210

.
ppo-u.5
for
18101554

.
ppo-u.5
for
7474208

.
ath-u.5
for
AT3G22430

.
vvi-u.5
for
100259596

.
sly-u.5
for
101252627

.
osa-u.5
for
4331689

.
zma-u.5
for
103644434

.
zma-u.5
for
100194318

.


Ortholog ID: 8956
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G22430 LOC100779864 LOC100805242 LOC101252627 LOC4331689 LOC100194318 LOC103644434 LOC103869037 LOC100259596 LOC7474208 LOC18101554 LOC25485210 LOC123084876 LOC123098482 LOC123449495 LOC107891937 LOC107888885 LOC106388241 LOC125608776 LOC8085456 LOC102579696 LOC102629231 LOC100841373 LOC107784773 LOC107791045
Function* RNA recognition motif XS domain protein protein SUPPRESSOR OF GENE SILENCING 3 uncharacterized LOC100805242 uncharacterized LOC101252627 uncharacterized LOC4331689 XS domain containing protein expressed protein SUPPRESSOR OF GENE SILENCING 3 uncharacterized LOC103869037 uncharacterized LOC100259596 uncharacterized LOC7474208 putative proline-rich receptor-like protein kinase PERK11 uncharacterized LOC25485210 formin-like protein 7 formin-like protein 7 early nodulin-75-like uncharacterized LOC107891937 uncharacterized LOC107888885 uncharacterized LOC106388241 uncharacterized LOC125608776 uncharacterized LOC8085456 uncharacterized LOC102579696 hypothetical protein wiskott-Aldrich syndrome protein family member 2 uncharacterized LOC107784773 uncharacterized LOC107791045
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03250 Viral life cycle - HIV-1 2
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03015 mRNA surveillance pathway 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821813 100779864 100805242 101252627 4331689 100194318 103644434 103869037 100259596 7474208 18101554 25485210 123084876 123098482 123449495 107891937 107888885 106388241 125608776 8085456 102579696 102629231 100841373 107784773 107791045
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