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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100780447   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 gma-r.7   100780447   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 gma-m.5   100780447   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100780314   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   25490146   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 ppo-u.5   7497563   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 ath-u.5   OVA4   Nucleotidylyl transferase superfamily protein 
 vvi-u.5   100262715   tryptophanyl-tRNA synthetase-like 
 sly-u.5   101244069   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 osa-u.5   4326551   tryptophan--tRNA ligase, chloroplastic/mitochondrial 
 zma-u.5   100272291   uncharacterized LOC100272291 

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Top 50 coexpressed genes to 100780447 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100780447 (gma-u.5 coexpression data)

CoexMap"100780447"


gmaLOC100780447 | Entrez gene ID : 100780447    
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00970 [list] [network] Aminoacyl-tRNA biosynthesis (137 genes)
GO BP
GO:0006436 [list] [network] tryptophanyl-tRNA aminoacylation  (4 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1058 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (1168 genes)  IEA  
GO MF
GO:0004830 [list] [network] tryptophan-tRNA ligase activity  (4 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3753 genes)  IEA  
Protein XP_003523753.1 [sequence] [blastp]
XP_006578241.1 [sequence] [blastp]
XP_025983983.1 [sequence] [blastp]
XP_040870808.1 [sequence] [blastp]
XP_040870809.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_003523753.1)
chlo 8,  mito 1  (predict for XP_006578241.1)
chlo 8,  mito 1  (predict for XP_025983983.1)
chlo 8,  mito 1  (predict for XP_040870808.1)
chlo 8,  mito 1  (predict for XP_040870809.1)
Subcellular
localization
TargetP
chlo 7,  mito 4  (predict for XP_003523753.1)
chlo 8,  mito 4  (predict for XP_006578241.1)
chlo 8,  mito 4  (predict for XP_025983983.1)
chlo 8,  mito 3  (predict for XP_040870808.1)
chlo 7,  mito 4  (predict for XP_040870809.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100780447

.
gma-r.7
for
100780447

.
gma-m.5
for
100780447

.
gma-u.5
for
100780314

.
mtr-u.5
for
25490146

.
ppo-u.5
for
7497563

.
ath-u.5
for
OVA4

.
vvi-u.5
for
100262715

.
sly-u.5
for
101244069

.
osa-u.5
for
4326551

.
zma-u.5
for
100272291

.


Ortholog ID: 8887
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol OVA4 LOC100780314 LOC100780447 LOC101244069 LOC4326551 LOC100272291 LOC103864695 LOC103857114 LOC100262715 LOC7497563 LOC25490146 LOC123079054 LOC123070641 LOC123444381 LOC107897091 LOC121203508 LOC106390850 LOC106397343 CHLRE_05g238322v5 LOC8062172 LOC102598687 LOC102623930 LOC100826862 LOC107775100 LOC107791065
Function* Nucleotidylyl transferase superfamily protein tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial uncharacterized LOC100272291 tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophanyl-tRNA synthetase-like tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial uncharacterized protein tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial tryptophan--tRNA ligase, chloroplastic/mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 5
ath03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 3
osa00970 Aminoacyl-tRNA biosynthesis 2
osa03010 Ribosome 2
osa00860 Porphyrin metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 4
bra03018 RNA degradation 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 4
bra00230 Purine metabolism 2
bra00730 Thiamine metabolism 2
bra01232 Nucleotide metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 11
tae00450 Selenocompound metabolism 3
tae00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 11
tae00450 Selenocompound metabolism 3
tae00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna01240 Biosynthesis of cofactors 3
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 6
cre03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 5
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
cit00860 Porphyrin metabolism 3
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 3
nta03420 Nucleotide excision repair 3
nta00270 Cysteine and methionine metabolism 2
nta00470 D-Amino acid metabolism 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00270 Cysteine and methionine metabolism 2
nta00470 D-Amino acid metabolism 2
nta00230 Purine metabolism 2
nta00051 Fructose and mannose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817126 100780314 100780447 101244069 4326551 100272291 103864695 103857114 100262715 7497563 25490146 123079054 123070641 123444381 107897091 121203508 106390850 106397343 5723283 8062172 102598687 102623930 100826862 107775100 107791065
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