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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   GA3OX1   gibberellin 3-beta-dioxygenase 1 
 gma-u.5   GA3OX6   gibberellin 3-beta-dioxygenase 6 
 gma-u.5   GA3OX3   gibberellin 3-beta-dioxygenase 3 
 mtr-u.5   11432515   gibberellin 3-beta-dioxygenase 1 
 mtr-u.5   11432838   gibberellin 3-beta-dioxygenase 1 
 ppo-u.5   7475736   gibberellin 3-beta-dioxygenase 1 
 ath-u.5   GA3OX2   gibberellin 3-oxidase 2 
 ath-u.5   GA3OX1   gibberellin 3-oxidase 1 
 sly-u.5   GA3ox1   gibberellin 3-beta-dioxygenase 1 
 osa-u.5   4323864   gibberellin 3-beta-dioxygenase 2-like 
 zma-u.5   Dwarf1   Gibberellin 3-oxidase 

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Top 50 coexpressed genes to GA3OX1 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GA3OX1 (gma-u.5 coexpression data)

CoexMap"100780857"


gmaGA3OX4 | Entrez gene ID : 100780857      
Species gma mtr ppo ath sly osa zma sbi nta bra cre vvi cit hvu bdi sot tae bna ghi
Paralog 3 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00904 [list] [network] Diterpenoid biosynthesis (59 genes)
GO BP
GO:0009686 [list] [network] gibberellin biosynthetic process  (23 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (218 genes)  IEA  
GO CC
GO MF
GO:0016707 [list] [network] gibberellin 3-beta-dioxygenase activity  (8 genes)  IEA  
Protein XP_003544624.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 3,  chlo 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_003544624.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003544624.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
GA3OX1

.
gma-u.5
for
GA3OX6

.
gma-u.5
for
GA3OX3

.
mtr-u.5
for
11432515

.
mtr-u.5
for
11432838

.
ppo-u.5
for
7475736

.
ath-u.5
for
GA3OX2

.
ath-u.5
for
GA3OX1

.
sly-u.5
for
GA3ox1

.
osa-u.5
for
4323864

.
zma-u.5
for
Dwarf1

.


Ortholog ID: 1181
Species ath gma sly osa zma ppo mtr mtr tae hvu ghi sbi sot sot bdi nta nta
Symbol GA3OX2 GA3OX3 GA3ox1 LOC4323864 Dwarf1 LOC7475736 LOC11432515 LOC11432838 LOC123186485 LOC123439542 LOC107937357 LOC8078789 LOC102597914 LOC107059310 LOC100835718 LOC107821651 LOC107824735
Function* gibberellin 3-oxidase 2 gibberellin 3-beta-dioxygenase 3 gibberellin 3-beta-dioxygenase 1 gibberellin 3-beta-dioxygenase 2-like Gibberellin 3-oxidase gibberellin 3-beta-dioxygenase 1 gibberellin 3-beta-dioxygenase 1 gibberellin 3-beta-dioxygenase 1 gibberellin 3-beta-dioxygenase 2-3-like gibberellin 3-beta-dioxygenase 2-2 gibberellin 3-beta-dioxygenase 1 gibberellin 3-beta-dioxygenase 2-2 gibberellin 3-beta-dioxygenase 1-like gibberellin 3-beta-dioxygenase 1-like gibberellin 3-beta-dioxygenase 2-2 gibberellin 3-beta-dioxygenase 1 gibberellin 3-beta-dioxygenase 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00941 Flavonoid biosynthesis 4
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00902 Monoterpenoid biosynthesis 2
mtr00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 2
tae00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00591 Linoleic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00904 Diterpenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844374 100776755 543503 4323864 101202726 7475736 11432515 11432838 123186485 123439542 107937357 8078789 102597914 107059310 100835718 107821651 107824735
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