ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100781267	protein YABBY 3
gma-r.7	100781267	protein YABBY 3
gma-u.5	100786175	protein YABBY 7
gma-u.5	100794423	protein YABBY 5
gma-u.5	FILA	YABBY protein FILa
ppo-u.5	7488885	axial regulator YABBY 1
ppo-u.5	18096332	axial regulator YABBY 1
ppo-u.5	7465527	protein YABBY 4
ath-u.5	AFO	Plant-specific transcription factor YABBY family protein
vvi-u.5	100243667	axial regulator YABBY 1
vvi-u.5	100267708	protein YABBY 4
sly-u.5	YABBY1a	axial regulator YABBY1a
sly-u.5	YABBY1b	axial regulator YABBY1b
osa-u.5	4330130	protein YABBY 4-like
osa-u.5	4336518	protein YABBY 5-like
zma-u.5	100193442	putative YABBY domain transcription factor family protein
zma-u.5	542128	yabby14
zma-u.5	542129	protein YABBY 4

Annotation

functional annotation

KEGG

GO BP

GO:1902183 [list] [network] regulation of shoot apical meristem development	(4 genes)	IEA
GO:2000024 [list] [network] regulation of leaf development	(4 genes)	IEA
GO:0009944 [list] [network] polarity specification of adaxial/abaxial axis	(10 genes)	IEA
GO:0010158 [list] [network] abaxial cell fate specification	(20 genes)	IEA
GO:0045165 [list] [network] cell fate commitment	(44 genes)	IEA
GO:0010154 [list] [network] fruit development	(52 genes)	IEA
GO:0007275 [list] [network] multicellular organism development	(415 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(5531 genes)

IEA

GO MF

Protein

NP_001344718.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for NP_001344718.1)

Subcellular
localization
TargetP

chlo 7, other 6

(predict for NP_001344718.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100781267	gma-r.7 for 100781267	gma-u.5 for 100786175	gma-u.5 for 100794423	gma-u.5 for FILA	ppo-u.5 for 7488885	ppo-u.5 for 18096332	ppo-u.5 for 7465527	ath-u.5 for AFO	vvi-u.5 for 100243667	vvi-u.5 for 100267708	sly-u.5 for YABBY1a	sly-u.5 for YABBY1b	osa-u.5 for 4330130	osa-u.5 for 4336518	zma-u.5 for 100193442	zma-u.5 for 542128	zma-u.5 for 542129

Ortholog

Ortholog ID: 2893

Species

gma

ppo

ath

bra

vvi

ghi

cit

sly

sot

nta

osa

zma

tae

sbi

bdi

Symbol

AFO

YABBY1a

YABBY1b

Function^*

protein YABBY 5

protein YABBY 3

protein YABBY 4

axial regulator YABBY 1

Plant-specific transcription factor YABBY family protein

axial regulator YABBY 1

protein YABBY 4

axial regulator YABBY 1

axial regulator YABBY 1-like

axial regulator YABBY 1

axial regulator YABBY1a

axial regulator YABBY1b

axial regulator YABBY 1

protein YABBY 4

axial regulator YABBY 1

protein YABBY 5-like

protein YABBY 4-like

putative YABBY domain transcription factor family protein

yabby14

protein YABBY 4

protein YABBY 5

protein YABBY 4

protein YABBY 5

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi04016	MAPK signaling pathway - plant	2
ghi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00040	Pentose and glucuronate interconversions	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00040	Pentose and glucuronate interconversions	3

Expression

Expression pattern

Entrez Gene ID^*

100794423

100781267

7465527

7488885

819127

103866196

103830131

100267708

100243667

121211138

107886089

102622362

102614498

101246760

101247051

102604849

102577797

107802952

107811927

4336518

4330130

100193442

542128

123127847

123137614

8083323

8075170

100831851

100845555

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100781267 (gma-u.5 coexpression data)

Top 50 enrichment test to 100781267 (gma-u.5 coexpression data)


Species	gma	ppo	ath	vvi	sly	osa	zma	bdi	mtr	bra	hvu	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	3	1	2	2	2	3	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100781267 (gma-u.5 coexpression data)

Top 50 enrichment test to 100781267 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**