ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100781288	protein OSB2, chloroplastic
gma-r.7	100781288	protein OSB2, chloroplastic
gma-m.5	100781288	protein OSB2, chloroplastic
gma-u.5	100818465	protein OSB1, mitochondrial
gma-u.5	100816851	protein OSB1, mitochondrial
gma-u.5	100796160	protein OSB2, chloroplastic
mtr-u.5	11412580	protein OSB1, mitochondrial
mtr-u.5	11423120	protein OSB2, chloroplastic
ppo-u.5	7480001	protein OSB2, chloroplastic
ppo-u.5	7454322	protein OSB2, chloroplastic
ppo-u.5	18104947	protein OSB1, mitochondrial
ath-u.5	OSB1	Primosome PriB/single-strand DNA-binding protein
vvi-u.5	100242562	protein OSB2, chloroplastic
sly-u.5	101244412	single-stranded DNA binding protein-like protein
sly-u.5	101264117	protein OSB1, mitochondrial-like
osa-u.5	4333513	protein OSB2, chloroplastic
osa-u.5	9267160	protein OSB1, mitochondrial
zma-u.5	100276246	uncharacterized LOC100276246
zma-u.5	100282454	uncharacterized LOC100282454
zma-u.5	100283943	single-strand binding protein

Annotation

functional annotation

KEGG

GO BP

GO:0051096 [list] [network] positive regulation of helicase activity	(8 genes)	IEA
GO:0006264 [list] [network] mitochondrial DNA replication	(9 genes)	IEA

GO CC

GO:0042645 [list] [network] mitochondrial nucleoid

(8 genes)

IEA

GO MF

GO:0003697 [list] [network] single-stranded DNA binding

(161 genes)

IEA

Protein

XP_003518896.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, mito 1

(predict for XP_003518896.1)

Subcellular
localization
TargetP

chlo 8

(predict for XP_003518896.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100781288	gma-r.7 for 100781288	gma-m.5 for 100781288	gma-u.5 for 100818465	gma-u.5 for 100816851	gma-u.5 for 100796160	mtr-u.5 for 11412580	mtr-u.5 for 11423120	ppo-u.5 for 7480001	ppo-u.5 for 7454322	ppo-u.5 for 18104947	ath-u.5 for OSB1	vvi-u.5 for 100242562	sly-u.5 for 101244412	sly-u.5 for 101264117	osa-u.5 for 4333513	osa-u.5 for 9267160	zma-u.5 for 100276246	zma-u.5 for 100282454	zma-u.5 for 100283943

Ortholog

Ortholog ID: 3872

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

OSB1

Function^*

protein OSB2, chloroplastic

protein OSB1, mitochondrial

protein OSB2, chloroplastic

protein OSB1, mitochondrial

Primosome PriB/single-strand DNA-binding protein

protein OSB1, mitochondrial

protein OSB2, chloroplastic

protein OSB1, mitochondrial-like

protein OSB1, mitochondrial

protein OSB2, chloroplastic-like

protein OSB1, mitochondrial-like

single-stranded DNA binding protein-like protein

protein OSB2, chloroplastic-like

protein OSB1, mitochondrial-like

protein OSB1, mitochondrial

protein OSB2, chloroplastic

protein OSB1, mitochondrial

uncharacterized LOC100276246

single-strand binding protein

protein OSB2, chloroplastic

protein OSB1, mitochondrial

protein OSB2, chloroplastic-like

protein OSB1, mitochondrial-like

protein OSB2, chloroplastic

protein OSB1, mitochondrial

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00760	Nicotinate and nicotinamide metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00562	Inositol phosphate metabolism	2
mtr04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	3
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi00561	Glycerolipid metabolism	2
ghi00566	Sulfoquinovose metabolism	2
ghi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4
ghi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	3
bna03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00510	N-Glycan biosynthesis	2
cit00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2
sly03018	RNA degradation	2
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	2
nta00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	4
nta03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03440	Homologous recombination	3
tae00240	Pyrimidine metabolism	2
tae01232	Nucleotide metabolism	2
tae01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03440	Homologous recombination	2
tae00240	Pyrimidine metabolism	2
tae01232	Nucleotide metabolism	2
tae01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00240	Pyrimidine metabolism	2
bdi01232	Nucleotide metabolism	2
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	3
cre00240	Pyrimidine metabolism	2
cre01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

100796160

100818465

11412580

11423120

7454322

18104947

841183

103833065

100242562

107955470

107941655

125577004

106432624

102627636

102607845

101264117

101244412

102578435

102583761

107824950

107779956

4333513

9267160

100276246

100283943

123113243

123122750

123452143

123447793

8062244

8062513

100840472

100829773

5728724

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100781288 (gma-u.5 coexpression data)

Top 50 enrichment test to 100781288 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	6	2	3	1	1	2	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100781288 (gma-u.5 coexpression data)

Top 50 enrichment test to 100781288 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**