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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100781562   transcription elongation factor 1 homolog 
 gma-r.7   100781562   transcription elongation factor 1 homolog 
 gma-u.5   100778262   transcription elongation factor 1 homolog 
 mtr-u.5   25493060   transcription elongation factor 1 homolog 
 ppo-u.5   18110184   transcription elongation factor 1 homolog 
 ppo-u.5   7485139   transcription elongation factor 1 homolog 
 ath-u.5   AT5G46030   transcription elongation factor-like protein 
 bra-r.6   103827760   transcription elongation factor 1 homolog 
 bra-r.6   103853681   transcription elongation factor 1 homolog 
 vvi-u.5   100253769   transcription elongation factor 1 homolog 
 vvi-u.5   100246889   transcription elongation factor 1 homolog 
 ghi-r.1   107962965   transcription elongation factor 1 homolog 
 ghi-r.1   107960221   transcription elongation factor 1 homolog 
 ghi-r.1   107943300   transcription elongation factor 1 homolog 
 bna-r.1   106436357   transcription elongation factor 1 homolog 
 bna-r.1   106382456   transcription elongation factor 1 homolog 
 bna-r.1   106381776   transcription elongation factor 1 homolog 
 cit-r.1   102628584   transcription elongation factor 1 homolog 
 sly-u.5   101252629   transcription elongation factor 1 homolog 
 sly-u.5   101268159   transcription elongation factor 1 homolog 
 sot-r.1   102585461   transcription elongation factor 1 homolog 
 sot-r.1   102587866   transcription elongation factor 1 homolog 
 sot-r.1   102579579   transcription elongation factor 1 homolog 
 nta-r.1   107759182   transcription elongation factor 1 homolog 
 nta-r.1   107810742   transcription elongation factor 1 homolog 
 nta-r.1   107794856   transcription elongation factor 1 homolog 
 osa-u.5   4328219   transcription elongation factor 1 homolog 
 osa-u.5   4343996   transcription elongation factor 1 homolog 
 zma-u.5   103639764   uncharacterized LOC103639764 
 tae-r.2   123069449   transcription elongation factor 1 homolog 
 sbi-r.1   8069161   transcription elongation factor 1 homolog 
 bdi-r.1   100837462   transcription elongation factor 1 homolog 
 cre-r.1   CHLRE_17g702550v5   uncharacterized protein 

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Top 50 coexpressed genes to 100781562 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100781562 (gma-u.5 coexpression data)

CoexMap"100781562"


gmaLOC100781562 | Entrez gene ID : 100781562    
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae sbi bdi cre hvu
Paralog 3 1 2 1 2 2 3 3 1 2 3 3 2 1 1 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006368 [list] [network] transcription elongation by RNA polymerase II  (35 genes)  IEA  
GO CC
GO:0008023 [list] [network] transcription elongation factor complex  (51 genes)  IEA  
GO MF
GO:0000993 [list] [network] RNA polymerase II complex binding  (35 genes)  IEA  
Protein XP_040864082.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 2,  extr 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_040864082.1)
Subcellular
localization
TargetP
other 6  (predict for XP_040864082.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100781562
gma-r.7
for
100781562
gma-u.5
for
100778262
mtr-u.5
for
25493060
ppo-u.5
for
18110184
ppo-u.5
for
7485139
ath-u.5
for
AT5G46030
bra-r.6
for
103827760
bra-r.6
for
103853681
vvi-u.5
for
100253769
vvi-u.5
for
100246889
ghi-r.1
for
107962965
ghi-r.1
for
107960221
ghi-r.1
for
107943300
bna-r.1
for
106436357
bna-r.1
for
106382456
bna-r.1
for
106381776
cit-r.1
for
102628584
sly-u.5
for
101252629
sly-u.5
for
101268159
sot-r.1
for
102585461
sot-r.1
for
102587866
sot-r.1
for
102579579
nta-r.1
for
107759182
nta-r.1
for
107810742
nta-r.1
for
107794856
osa-u.5
for
4328219
osa-u.5
for
4343996
zma-u.5
for
103639764
tae-r.2
for
123069449
sbi-r.1
for
8069161
bdi-r.1
for
100837462
cre-r.1
for
CHLRE_17g702550v5


Ortholog ID: 1438
Species gma gma mtr ppo ppo ath bra bra vvi vvi ghi ghi bna bna bna cit sly sly sot sot sot nta nta nta osa osa tae tae sbi bdi cre
Symbol LOC100781562 LOC100778262 LOC25493060 LOC18110184 LOC7485139 AT5G46030 LOC103827760 LOC103853681 LOC100253769 LOC100246889 LOC107962965 LOC107941193 LOC106436357 LOC106382456 LOC106436373 LOC102628584 LOC101252629 LOC101268159 LOC102585461 LOC102587866 LOC102579579 LOC107759182 LOC107794856 LOC107794612 LOC4328219 LOC4343996 LOC123069449 LOC123147824 LOC8069161 LOC100837462 CHLRE_17g702550v5
Function* transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor-like protein transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog transcription elongation factor 1 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03020 RNA polymerase 2
mtr03420 Nucleotide excision repair 2
mtr03083 Polycomb repressive complex 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo04141 Protein processing in endoplasmic reticulum 3
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 3
ath03420 Nucleotide excision repair 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
vvi03018 RNA degradation 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 3
bna03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00770 Pantothenate and CoA biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00770 Pantothenate and CoA biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly03040 Spliceosome 2
sly03020 RNA polymerase 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03022 Basal transcription factors 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 5
sot03083 Polycomb repressive complex 4
sot04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04145 Phagosome 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 5
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04145 Phagosome 2
nta04148 Efferocytosis 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 4
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 6
cre04814 Motor proteins 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100781562 100778262 25493060 18110184 7485139 834644 103827760 103853681 100253769 100246889 107962965 107941193 106436357 106382456 106436373 102628584 101252629 101268159 102585461 102587866 102579579 107759182 107794856 107794612 4328219 4343996 123069449 123147824 8069161 100837462 5717278
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