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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100782843   transcription initiation factor TFIID subunit 7-like 
 gma-r.7   100782843   transcription initiation factor TFIID subunit 7-like 
 gma-u.5   100810740   transcription initiation factor TFIID subunit 7 
 gma-u.5   100806004   transcription initiation factor TFIID subunit 7-like 
 gma-u.5   100781772   transcription initiation factor TFIID subunit 7 
 mtr-u.5   11433231   transcription initiation factor TFIID subunit 7 
 ppo-u.5   7463581   transcription initiation factor TFIID subunit 7 
 ppo-u.5   7457707   transcription initiation factor TFIID subunit 7 
 ath-u.5   TAF7   TBP-associated factor 7 
 vvi-u.5   100258782   transcription initiation factor TFIID subunit 7 
 sly-u.5   101261021   transcription initiation factor TFIID subunit 7 
 osa-u.5   4338489   transcription initiation factor TFIID subunit 7 
 zma-u.5   103645861   transcription initiation factor TFIID subunit 7 
 zma-u.5   103644121   transcription initiation factor TFIID subunit 7 
 zma-u.5   103640335   transcription initiation factor TFIID subunit 7 

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Top 50 coexpressed genes to 100782843 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100782843 (gma-u.5 coexpression data)

CoexMap"100782843"


gmaLOC100782843 | Entrez gene ID : 100782843      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 1 2 1 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03022 [list] [network] Basal transcription factors (90 genes)
GO BP
GO:0051123 [list] [network] RNA polymerase II preinitiation complex assembly  (19 genes)  IEA  
GO:0006367 [list] [network] transcription initiation at RNA polymerase II promoter  (62 genes)  IEA  
GO CC
GO:0005669 [list] [network] transcription factor TFIID complex  (35 genes)  IEA  
GO MF
GO:0016251 [list] [network] RNA polymerase II general transcription initiation factor activity  (39 genes)  IEA  
Protein NP_001242881.2 [sequence] [blastp]
XP_014621967.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  plas 1,  extr 1  (predict for NP_001242881.2)
nucl 9,  plas 1,  extr 1  (predict for XP_014621967.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001242881.2)
other 6  (predict for XP_014621967.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100782843

.
gma-r.7
for
100782843

.
gma-u.5
for
100810740

.
gma-u.5
for
100806004

.
gma-u.5
for
100781772

.
mtr-u.5
for
11433231

.
ppo-u.5
for
7463581

.
ppo-u.5
for
7457707

.
ath-u.5
for
TAF7

.
vvi-u.5
for
100258782

.
sly-u.5
for
101261021

.
osa-u.5
for
4338489

.
zma-u.5
for
103645861

.
zma-u.5
for
103644121

.
zma-u.5
for
103640335

.


Ortholog ID: 4472
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi nta nta
Symbol TAF7 LOC100806004 LOC100781772 LOC101261021 LOC4338489 LOC103640335 LOC100193879 LOC103829794 LOC103871047 LOC100258782 LOC7463581 LOC7457707 LOC11433231 LOC123074579 LOC123070228 LOC123443979 LOC123409804 LOC121220148 LOC107938391 LOC125601103 LOC106350974 CHLRE_01g011200v5 LOC8077195 LOC8054955 LOC102594176 LOC107057648 LOC102614199 LOC100831039 LOC107808629 LOC107774462
Function* TBP-associated factor 7 transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 Transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7-like uncharacterized protein transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 3
sly03420 Nucleotide excision repair 3
sly03040 Spliceosome 2
sly03022 Basal transcription factors 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
zma04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03020 RNA polymerase 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
ppo03420 Nucleotide excision repair 2
ppo03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00511 Other glycan degradation 3
tae04142 Lysosome 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 4
hvu04144 Endocytosis 2
hvu04145 Phagosome 2
hvu04148 Efferocytosis 2
hvu00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00600 Sphingolipid metabolism 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 4
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna03022 Basal transcription factors 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna03022 Basal transcription factors 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03022 Basal transcription factors 3
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03022 Basal transcription factors 4
sot03040 Spliceosome 4
sot03018 RNA degradation 3
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit04141 Protein processing in endoplasmic reticulum 3
cit03040 Spliceosome 2
cit03083 Polycomb repressive complex 2
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 4
bdi00190 Oxidative phosphorylation 3
bdi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841975 100806004 100781772 101261021 4338489 103640335 100193879 103829794 103871047 100258782 7463581 7457707 11433231 123074579 123070228 123443979 123409804 121220148 107938391 125601103 106350974 5715027 8077195 8054955 102594176 107057648 102614199 100831039 107808629 107774462
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