ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	PHR30	MYB-CC domain-containing transcription factor PHR30
gma-r.7	PHR30	MYB-CC domain-containing transcription factor PHR30
gma-m.5	PHR30	MYB-CC domain-containing transcription factor PHR30
gma-u.5	PHR14	MYB-CC domain-containing transcription factor PHR14
gma-u.5	PHR25	MYB-CC domain-containing transcription factor PHR25
gma-u.5	PHR7	MYB-CC domain-containing transcription factor PHR7
mtr-u.5	25498755	myb family transcription factor PHL7
mtr-u.5	11411079	myb family transcription factor PHL7
mtr-u.5	11435643	myb family transcription factor PHL7
ppo-u.5	18106009	myb family transcription factor PHL7
ppo-u.5	7458457	myb family transcription factor PHL7
ath-u.5	AT2G01060	myb-like HTH transcriptional regulator family protein
bra-r.6	103827611	myb family transcription factor PHL7
bra-r.6	103832766	myb family transcription factor PHL7
vvi-u.5	100243697	myb family transcription factor PHL7
vvi-u.5	100248144	myb family transcription factor PHL7
vvi-u.5	100260393	myb-related protein 2
ghi-r.1	107963743	myb family transcription factor PHL7
ghi-r.1	107960133	myb family transcription factor PHL7
bna-r.1	106454384	myb family transcription factor PHL7
bna-r.1	125594074	myb family transcription factor PHL7
bna-r.1	106381939	myb family transcription factor PHL7
cit-r.1	102628581	myb family transcription factor PHL7
sly-u.5	101257437	protein PHR1-LIKE 1-like
sly-u.5	101257428	myb family transcription factor PHL7
sot-r.1	102604067	myb family transcription factor APL-like
nta-r.1	107765049	myb family transcription factor PHL7
osa-u.5	4346661	myb family transcription factor PHL7
osa-u.5	4341499	myb family transcription factor PHL7
osa-u.5	4339175	myb family transcription factor PHL7
zma-u.5	100272524	uncharacterized LOC100272524
zma-u.5	100286254	MYB-CC type transfactor
zma-u.5	103645799	Myb family transcription factor PHL5
tae-r.2	123148240	myb family transcription factor PHL7
tae-r.2	123121140	myb family transcription factor PHL7
tae-r.2	123111661	myb family transcription factor PHL7
hvu-r.1	123452608	myb family transcription factor PHL7-like
hvu-r.1	123444133	myb family transcription factor PHL7-like
hvu-r.1	123413204	protein PHR1-LIKE 2-like
sbi-r.1	8064668	myb family transcription factor PHL7
sbi-r.1	8064173	myb family transcription factor PHL7
bdi-r.1	100832625	myb family transcription factor PHL7
bdi-r.1	100832165	myb family transcription factor PHL7
bdi-r.1	100838837	myb family transcription factor PHL7
cre-r.1	CHLRE_12g495100v5	uncharacterized protein

Top 50 coexpressed genes to PHR30 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to PHR30 (gma-u.5 coexpression data)

CoexMap"100783132"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003700 [list] [network] DNA-binding transcription factor activity	(2313 genes)	IEA
GO:0003677 [list] [network] DNA binding	(3517 genes)	IEA

Protein

NP_001276140.2 [sequence] [blastp]
XP_006604294.1 [sequence] [blastp]
XP_006604295.1 [sequence] [blastp]
XP_006604296.1 [sequence] [blastp]
XP_040868320.1 [sequence] [blastp]
XP_040868321.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, chlo 1, plas 1	(predict for NP_001276140.2)
nucl 9, chlo 1, plas 1	(predict for XP_006604294.1)
nucl 9, chlo 1, plas 1	(predict for XP_006604295.1)
nucl 7, chlo 2	(predict for XP_006604296.1)
nucl 9, chlo 1, plas 1	(predict for XP_040868320.1)
nucl 7, chlo 2	(predict for XP_040868321.1)

Subcellular
localization
TargetP

other 5	(predict for NP_001276140.2)
other 5	(predict for XP_006604294.1)
other 5	(predict for XP_006604295.1)
other 4	(predict for XP_006604296.1)
other 5	(predict for XP_040868320.1)
other 4	(predict for XP_040868321.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for PHR30	gma-r.7 for PHR30	gma-m.5 for PHR30	gma-u.5 for PHR14	gma-u.5 for PHR25	gma-u.5 for PHR7	mtr-u.5 for 25498755	mtr-u.5 for 11411079	mtr-u.5 for 11435643	ppo-u.5 for 18106009	ppo-u.5 for 7458457	ath-u.5 for AT2G01060	bra-r.6 for 103827611	bra-r.6 for 103832766	vvi-u.5 for 100243697	vvi-u.5 for 100248144	vvi-u.5 for 100260393	ghi-r.1 for 107963743	ghi-r.1 for 107960133	bna-r.1 for 106454384	bna-r.1 for 125594074	bna-r.1 for 106381939	cit-r.1 for 102628581	sly-u.5 for 101257437	sly-u.5 for 101257428	sot-r.1 for 102604067	nta-r.1 for 107765049	osa-u.5 for 4346661	osa-u.5 for 4341499	osa-u.5 for 4339175	zma-u.5 for 100272524	zma-u.5 for 100286254	zma-u.5 for 103645799	tae-r.2 for 123148240	tae-r.2 for 123121140	tae-r.2 for 123111661	hvu-r.1 for 123452608	hvu-r.1 for 123444133	hvu-r.1 for 123413204	sbi-r.1 for 8064668	sbi-r.1 for 8064173	bdi-r.1 for 100832625	bdi-r.1 for 100832165	bdi-r.1 for 100838837	cre-r.1 for CHLRE_12g495100v5

Ortholog

Ortholog ID: 1604

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

PHR30

PHR14

PPS4

Function^*

MYB-CC domain-containing transcription factor PHR30

MYB-CC domain-containing transcription factor PHR14