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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100784188   protein LOW PSII ACCUMULATION 1, chloroplastic 
 gma-r.7   100784188   protein LOW PSII ACCUMULATION 1, chloroplastic 
 gma-m.5   100784188   protein LOW PSII ACCUMULATION 1, chloroplastic 
 gma-u.5   100793204   protein LOW PSII ACCUMULATION 1, chloroplastic 
 mtr-u.5   11435276   protein LOW PSII ACCUMULATION 1, chloroplastic 
 ppo-u.5   7487775   protein LOW PSII ACCUMULATION 1, chloroplastic 
 ath-u.5   LPA1   tetratricopeptide repeat (TPR)-containing protein 
 vvi-u.5   100245310   protein LOW PSII ACCUMULATION 1, chloroplastic 
 sly-u.5   101252117   protein LOW PSII ACCUMULATION 1, chloroplastic 
 osa-u.5   4326021   protein LOW PSII ACCUMULATION 1, chloroplastic 
 zma-u.5   100275611   uncharacterized LOC100275611 

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Top 50 coexpressed genes to 100784188 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100784188 (gma-u.5 coexpression data)

CoexMap"100784188"


gmaLOC100784188 | Entrez gene ID : 100784188      
Species gma mtr ppo ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010270 [list] [network] photosystem II oxygen evolving complex assembly  (2 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1168 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003521557.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  golg 2,  chlo_mito 2,  E.R. 1,  golg_plas 1  (predict for XP_003521557.1)
Subcellular
localization
TargetP
chlo 4,  mito 3  (predict for XP_003521557.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100784188

.
gma-r.7
for
100784188

.
gma-m.5
for
100784188

.
gma-u.5
for
100793204

.
mtr-u.5
for
11435276

.
ppo-u.5
for
7487775

.
ath-u.5
for
LPA1

.
vvi-u.5
for
100245310

.
sly-u.5
for
101252117

.
osa-u.5
for
4326021

.
zma-u.5
for
100275611

.


Ortholog ID: 10482
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol LPA1 LOC100784188 LOC100793204 LOC101252117 LOC4326021 LOC100275611 LOC103836638 LOC100245310 LOC7487775 LOC11435276 LOC123068999 LOC123077529 LOC123442977 LOC121223746 LOC107924175 LOC106401041 LOC106401713 CHLRE_10g430150v5 LOC110434116 LOC102599536 LOC102616689 LOC100821693 LOC107815203 LOC107779630
Function* tetratricopeptide repeat (TPR)-containing protein protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic uncharacterized LOC100275611 protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic uncharacterized protein protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 8
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00970 Aminoacyl-tRNA biosynthesis 2
tae00270 Cysteine and methionine metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 2
bna00750 Vitamin B6 metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 4
bna00750 Vitamin B6 metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 7
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00564 Glycerophospholipid metabolism 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 5
nta03010 Ribosome 4
nta00450 Selenocompound metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839350 100784188 100793204 101252117 4326021 100275611 103836638 100245310 7487775 11435276 123068999 123077529 123442977 121223746 107924175 106401041 106401713 5728099 110434116 102599536 102616689 100821693 107815203 107779630
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