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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100784318   vacuolar-processing enzyme 
 gma-r.7   100784318   vacuolar-processing enzyme 
 gma-u.5   VPE   vacuolar-processing enzyme 
 gma-u.5   100788554   vacuolar-processing enzyme 
 gma-u.5   100791675   vacuolar-processing enzyme 
 mtr-u.5   11405547   legumain 
 mtr-u.5   25482000   vacuolar-processing enzyme 
 mtr-u.5   11439938   vacuolar-processing enzyme 
 ppo-u.5   18094383   vacuolar-processing enzyme-like 
 ppo-u.5   7462273   vacuolar-processing enzyme 
 ppo-u.5   7463725   vacuolar-processing enzyme 
 ath-u.5   BETA-VPE   beta vacuolar processing enzyme 
 ath-u.5   GAMMA-VPE   gamma vacuolar processing enzyme 
 ath-u.5   ALPHA-VPE   alpha-vacuolar processing enzyme 
 bra-r.6   103842166   vacuolar-processing enzyme alpha-isozyme 
 bra-r.6   103850260   vacuolar-processing enzyme gamma-isozyme 
 bra-r.6   103838040   vacuolar-processing enzyme beta-isozyme 
 vvi-u.5   100251259   vacuolar-processing enzyme 
 vvi-u.5   100260773   vacuolar-processing enzyme 
 vvi-u.5   100244137   vacuolar-processing enzyme 
 ghi-r.1   107953875   vacuolar-processing enzyme 
 ghi-r.1   107931740   vacuolar-processing enzyme 
 ghi-r.1   107929955   vacuolar-processing enzyme 
 bna-r.1   106413682   vacuolar-processing enzyme alpha-isozyme 
 bna-r.1   106393247   vacuolar-processing enzyme beta-isozyme 
 bna-r.1   106377574   vacuolar-processing enzyme gamma-isozyme 
 cit-r.1   127903698   vacuolar-processing enzyme-like 
 cit-r.1   102623739   legumain 
 cit-r.1   VPE   vacuolar-processing enzyme-like 
 sly-u.5   VPE1   vacuolar processing enzyme VPE1 
 sly-u.5   VPE5   vacuolar processing enzyme VPE5 
 sly-u.5   VPE2   vacuolar processing enzyme VPE2 
 sot-r.1   102596720   vacuolar-processing enzyme-like 
 sot-r.1   102583556   vacuolar-processing enzyme beta-isozyme 
 nta-r.1   107779843   vacuolar-processing enzyme 
 osa-u.5   4339804   vacuolar-processing enzyme 
 osa-u.5   4336523   vacuolar-processing enzyme beta-isozyme 1-like 
 zma-u.5   542077   vacuolar processing enzyme 1 
 zma-u.5   542609   senescence enhanced2b 
 zma-u.5   100192667   Vacuolar-processing enzyme gamma-isozyme 
 tae-r.2   123063694   vacuolar-processing enzyme 
 tae-r.2   123063693   vacuolar-processing enzyme gamma-isozyme 
 tae-r.2   123189920   vacuolar-processing enzyme beta-isozyme 1 
 hvu-r.1   123398317   vacuolar-processing enzyme-like 
 hvu-r.1   123427363   vacuolar-processing enzyme beta-isozyme 1-like 
 sbi-r.1   8083326   vacuolar-processing enzyme beta-isozyme 1 
 sbi-r.1   8066566   vacuolar-processing enzyme 
 sbi-r.1   8078601   vacuolar-processing enzyme 
 bdi-r.1   100821265   vacuolar-processing enzyme beta-isozyme 1 
 bdi-r.1   100835846   vacuolar-processing enzyme 
 bdi-r.1   100833696   vacuolar-processing enzyme beta-isozyme 1 
 cre-r.1   CHLRE_12g483550v5   uncharacterized protein 

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Top 50 coexpressed genes to 100784318 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100784318 (gma-u.5 coexpression data)

CoexMap"100784318"


gmaLOC100784318 | Entrez gene ID : 100784318      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 3 3 3 3 3 3 3 3 2 1 2 3 3 2 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx04142 [list] [network] Lysosome (152 genes)
GO BP
GO:0006624 [list] [network] vacuolar protein processing  (9 genes)  IEA  
GO:0051603 [list] [network] proteolysis involved in protein catabolic process  (660 genes)  IEA  
GO CC
GO MF
GO:0004197 [list] [network] cysteine-type endopeptidase activity  (107 genes)  IEA  
Protein XP_003550283.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 4,  chlo 1,  extr 1,  nucl 1,  mito 1,  E.R. 1,  golg 1  (predict for XP_003550283.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_003550283.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100784318
gma-r.7
for
100784318
gma-u.5
for
VPE
gma-u.5
for
100788554
gma-u.5
for
100791675
mtr-u.5
for
11405547
mtr-u.5
for
25482000
mtr-u.5
for
11439938
ppo-u.5
for
18094383
ppo-u.5
for
7462273
ppo-u.5
for
7463725
ath-u.5
for
BETA-VPE
ath-u.5
for
GAMMA-VPE
ath-u.5
for
ALPHA-VPE
bra-r.6
for
103842166
bra-r.6
for
103850260
bra-r.6
for
103838040
vvi-u.5
for
100251259
vvi-u.5
for
100260773
vvi-u.5
for
100244137
ghi-r.1
for
107953875
ghi-r.1
for
107931740
ghi-r.1
for
107929955
bna-r.1
for
106413682
bna-r.1
for
106393247
bna-r.1
for
106377574
cit-r.1
for
127903698
cit-r.1
for
102623739
cit-r.1
for
VPE
sly-u.5
for
VPE1
sly-u.5
for
VPE5
sly-u.5
for
VPE2
sot-r.1
for
102596720
sot-r.1
for
102583556
nta-r.1
for
107779843
osa-u.5
for
4339804
osa-u.5
for
4336523
zma-u.5
for
542077
zma-u.5
for
542609
zma-u.5
for
100192667
tae-r.2
for
123063694
tae-r.2
for
123063693
tae-r.2
for
123189920
hvu-r.1
for
123398317
hvu-r.1
for
123427363
sbi-r.1
for
8083326
sbi-r.1
for
8066566
sbi-r.1
for
8078601
bdi-r.1
for
100821265
bdi-r.1
for
100835846
bdi-r.1
for
100833696
cre-r.1
for
CHLRE_12g483550v5


Ortholog ID: 687
Species gma gma gma mtr mtr mtr ppo ppo ath ath ath bra bra bra vvi vvi vvi ghi ghi ghi bna bna bna cit cit cit sly sly sly sot sot nta osa osa zma zma zma tae tae tae hvu sbi sbi bdi bdi bdi cre
Symbol LOC100788554 LOC100807010 VPE2 LOC25482000 LOC11439938 LOC11432331 LOC18094383 LOC7463725 BETA-VPE GAMMA-VPE ALPHA-VPE LOC103842166 LOC103850260 LOC103838040 LOC100251259 LOC100260773 LOC100244137 LOC107931740 LOC107901497 LOC107886086 LOC106377574 LOC106368852 LOC106368548 LOC127903698 LOC102623739 VPE VPE5 VPE2 VPE4 LOC102596720 LOC102583556 LOC107779843 LOC4339804 LOC4324683 LOC542077 LOC542609 LOC542001 LOC123046148 LOC123046146 LOC123121688 LOC123427363 LOC8066566 LOC8078601 LOC100821265 LOC100835846 LOC100823658 CHLRE_12g483550v5
Function* vacuolar-processing enzyme vacuolar-processing enzyme vacuolar processing enzyme 2 vacuolar-processing enzyme vacuolar-processing enzyme vacuolar-processing enzyme gamma-isozyme vacuolar-processing enzyme-like vacuolar-processing enzyme beta vacuolar processing enzyme gamma vacuolar processing enzyme alpha-vacuolar processing enzyme vacuolar-processing enzyme alpha-isozyme vacuolar-processing enzyme gamma-isozyme vacuolar-processing enzyme beta-isozyme vacuolar-processing enzyme vacuolar-processing enzyme vacuolar-processing enzyme vacuolar-processing enzyme vacuolar-processing enzyme vacuolar-processing enzyme-like vacuolar-processing enzyme gamma-isozyme vacuolar-processing enzyme beta-isozyme vacuolar-processing enzyme alpha-isozyme vacuolar-processing enzyme-like legumain vacuolar-processing enzyme-like vacuolar processing enzyme VPE5 vacuolar processing enzyme VPE2 vacuolar processing enzyme VPE4 vacuolar-processing enzyme-like vacuolar-processing enzyme beta-isozyme vacuolar-processing enzyme vacuolar-processing enzyme vacuolar-processing enzyme vacuolar processing enzyme 1 senescence enhanced2b legumain-like protease vacuolar-processing enzyme beta-isozyme 1 vacuolar-processing enzyme beta-isozyme 1-like vacuolar-processing enzyme vacuolar-processing enzyme beta-isozyme 1-like vacuolar-processing enzyme vacuolar-processing enzyme vacuolar-processing enzyme beta-isozyme 1 vacuolar-processing enzyme vacuolar-processing enzyme uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma03250 Viral life cycle - HIV-1 2
gma03272 Virion - Hepatitis viruses 2
gma04144 Endocytosis 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 3
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 2
mtr00620 Pyruvate metabolism 2
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 2
ath00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 5
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 3
bra00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi04142 Lysosome 4
ghi00190 Oxidative phosphorylation 2
ghi04016 MAPK signaling pathway - plant 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
ghi04981 Folate transport and metabolism 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00430 Taurine and hypotaurine metabolism 2
bna00460 Cyanoamino acid metabolism 2
bna00480 Glutathione metabolism 2
bna00590 Arachidonic acid metabolism 2
bna00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 5
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 3
sly00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 5
sot00020 Citrate cycle (TCA cycle) 4
sot01200 Carbon metabolism 4
sot01210 2-Oxocarboxylic acid metabolism 4
sot00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 7
nta04626 Plant-pathogen interaction 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00250 Alanine, aspartate and glutamate metabolism 2
zma01200 Carbon metabolism 2
zma01210 2-Oxocarboxylic acid metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 5
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 4
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 4
tae00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00071 Fatty acid degradation 2
hvu01212 Fatty acid metabolism 2
hvu04144 Endocytosis 2
hvu00520 Amino sugar and nucleotide sugar metabolism 2
hvu01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 5
sbi00561 Glycerolipid metabolism 2
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04142 Lysosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100788554 100807010 547700 25482000 11439938 11432331 18094383 7463725 842569 829431 817135 103842166 103850260 103838040 100251259 100260773 100244137 107931740 107901497 107886086 106377574 106368852 106368548 127903698 102623739 102612763 778274 101265153 101245974 102596720 102583556 107779843 4339804 4324683 542077 542609 542001 123046148 123046146 123121688 123427363 8066566 8078601 100821265 100835846 100823658 5728723
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